Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZT3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZT3 entry

There is 1 chain in PDB entry 6ZT3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 0GLU 425
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 6ZT3. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
13 17Right-handed 310
Helix 2
AA2
A
21 29Right-handed alpha
Helix 3
AA3
A
29 35Right-handed alpha
Helix 4
AA4
A
38 59Right-handed alpha
Helix 5
AA5
A
94 102Right-handed alpha
Helix 6
AA6
A
123 131Right-handed alpha
Helix 7
AA7
A
186 201Right-handed alpha
Helix 8
AA8
A
255 265Right-handed alpha
Helix 9
AA9
A
266 268Right-handed 310
Helix 10
AB1
A
315 335Right-handed alpha
Helix 11
AB2
A
346 352Right-handed alpha
Helix 12
AB3
A
377 399Right-handed alpha
Helix 13
AB4
A
399 423Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 6ZT3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
154 155first strand
Strand 2
A
144 151anti-parallel
Strand 3
A
159 163anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
154 155first strand
Strand 2
A
144 151anti-parallel
Strand 3
A
132 141anti-parallel
Strand 4
A
168 175anti-parallel
Strand 5
A
75 79anti-parallel
Strand 6
A
64 69anti-parallel
Strand 7
A
205 210parallel
Strand 8
A
248 251anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
276 282first strand
Strand 2
A
285 293anti-parallel
Strand 3
A
354 362anti-parallel
Strand 4
A
300 305parallel
Strand 5
A
308 309anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
313 314first strand
Strand 2
A
374 375parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il