Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZTH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZTH entry

There are 2 chains in PDB entry 6ZTH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA -2	ASP 474
B	THR 0	SER 164

There are 75 helices in PDB entry 6ZTH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	18	Right-handed 310
Helix 2	AA2	A	19	30	Right-handed alpha
Helix 3	AA3	A	53	75	Right-handed alpha
Helix 4	AA4	A	86	100	Right-handed alpha
Helix 5	AA5	A	101	106	Right-handed 310
Helix 6	AA6	A	121	126	Right-handed 310
Helix 7	AA7	A	127	133	Right-handed alpha
Helix 8	AA8	A	144	152	Right-handed alpha
Helix 9	AA9	A	155	165	Right-handed alpha
Helix 10	AB1	A	166	168	Right-handed 310
Helix 11	AB2	A	170	174	Right-handed 310
Helix 12	AB3	A	186	190	Right-handed 310
Helix 13	AB4	A	194	199	Right-handed 310
Helix 14	AB5	A	207	212	Right-handed alpha
Helix 15	AB6	A	270	281	Right-handed alpha
Helix 16	AB7	A	284	306	Right-handed alpha
Helix 17	AB8	A	382	390	Right-handed alpha
Helix 18	AB9	B	13	18	Right-handed 310
Helix 19	AC1	B	19	29	Right-handed alpha
Helix 20	AC2	B	53	76	Right-handed alpha
Helix 21	AC3	B	86	100	Right-handed alpha
Helix 22	AC4	B	102	106	Right-handed 310
Helix 23	AC5	B	121	127	Right-handed 310
Helix 24	AC6	B	128	133	Right-handed alpha
Helix 25	AC7	B	144	152	Right-handed alpha
Helix 26	AC8	B	155	165	Right-handed alpha
Helix 27	AC9	B	166	168	Right-handed 310
Helix 28	AD1	B	170	174	Right-handed 310
Helix 29	AD2	B	186	190	Right-handed 310
Helix 30	AD3	B	194	199	Right-handed 310
Helix 31	AD4	B	207	212	Right-handed alpha
Helix 32	AD5	B	266	269	Right-handed 310
Helix 33	AD6	B	270	281	Right-handed alpha
Helix 34	AD7	B	284	306	Right-handed alpha
Helix 35	AD8	B	382	390	Right-handed alpha
Helix 36	AD9	C	13	18	Right-handed 310
Helix 37	AE1	C	19	30	Right-handed alpha
Helix 38	AE2	C	53	75	Right-handed alpha
Helix 39	AE3	C	86	99	Right-handed alpha
Helix 40	AE4	C	102	106	Right-handed 310
Helix 41	AE5	C	123	126	Right-handed 310
Helix 42	AE6	C	127	133	Right-handed alpha
Helix 43	AE7	C	144	152	Right-handed alpha
Helix 44	AE8	C	155	164	Right-handed alpha
Helix 45	AE9	C	165	168	Right-handed 310
Helix 46	AF1	C	170	174	Right-handed 310
Helix 47	AF2	C	186	190	Right-handed 310
Helix 48	AF3	C	194	199	Right-handed 310
Helix 49	AF4	C	207	212	Right-handed alpha
Helix 50	AF5	C	266	269	Right-handed 310
Helix 51	AF6	C	270	282	Right-handed alpha
Helix 52	AF7	C	284	306	Right-handed alpha
Helix 53	AF8	C	382	390	Right-handed alpha
Helix 54	AF9	C	391	395	Right-handed 310
Helix 55	AG1	D	13	18	Right-handed 310
Helix 56	AG2	D	19	30	Right-handed alpha
Helix 57	AG3	D	53	69	Right-handed alpha
Helix 58	AG4	D	69	75	Right-handed alpha
Helix 59	AG5	D	86	99	Right-handed alpha
Helix 60	AG6	D	102	106	Right-handed 310
Helix 61	AG7	D	121	126	Right-handed alpha
Helix 62	AG8	D	127	133	Right-handed alpha
Helix 63	AG9	D	144	152	Right-handed alpha
Helix 64	AH1	D	155	165	Right-handed alpha
Helix 65	AH2	D	166	168	Right-handed 310
Helix 66	AH3	D	170	174	Right-handed 310
Helix 67	AH4	D	186	190	Right-handed 310
Helix 68	AH5	D	194	199	Right-handed 310
Helix 69	AH6	D	207	212	Right-handed alpha
Helix 70	AH7	D	266	269	Right-handed 310
Helix 71	AH8	D	270	281	Right-handed alpha
Helix 72	AH9	D	284	306	Right-handed alpha
Helix 73	AI1	D	354	358	Right-handed 310
Helix 74	AI2	D	382	390	Right-handed alpha
Helix 75	AI3	D	391	395	Right-handed 310

There are 20 sheets in PDB entry 6ZTH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	242	246	first strand
Strand 2	A	176	182	parallel
Strand 3	A	108	114	parallel
Strand 4	A	78	84	parallel
Strand 5	A	1	6	parallel
Strand 6	A	40	45	parallel
Strand 7	B	453	456	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	230	237	first strand
Strand 2	A	216	223	anti-parallel
Strand 3	A	436	444	parallel
Strand 4	A	325	334	parallel
Strand 5	A	376	381	anti-parallel
Strand 6	A	363	368	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	308	312	first strand
Strand 2	A	317	321	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	343	348	first strand
Strand 2	A	398	404	anti-parallel
Strand 3	A	419	423	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	414	415	first strand
Strand 2	A	447	448	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	453	456	first strand
Strand 2	B	40	45	anti-parallel
Strand 3	B	2	6	parallel
Strand 4	B	79	84	parallel
Strand 5	B	108	114	parallel
Strand 6	B	176	182	parallel
Strand 7	B	242	246	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	231	237	first strand
Strand 2	B	216	222	anti-parallel
Strand 3	B	436	444	parallel
Strand 4	B	325	334	parallel
Strand 5	B	375	381	anti-parallel
Strand 6	B	363	368	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	308	312	first strand
Strand 2	B	317	321	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	343	348	first strand
Strand 2	B	398	404	anti-parallel
Strand 3	B	419	423	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	414	415	first strand
Strand 2	B	447	448	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	242	245	first strand
Strand 2	C	176	181	parallel
Strand 3	C	108	114	parallel
Strand 4	C	79	84	parallel
Strand 5	C	2	6	parallel
Strand 6	C	40	45	parallel
Strand 7	D	453	456	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	230	237	first strand
Strand 2	C	216	223	anti-parallel
Strand 3	C	437	444	parallel
Strand 4	C	325	334	parallel
Strand 5	C	375	381	anti-parallel
Strand 6	C	363	368	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	308	313	first strand
Strand 2	C	316	321	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	343	349	first strand
Strand 2	C	398	404	anti-parallel
Strand 3	C	419	423	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	414	415	first strand
Strand 2	C	447	448	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	453	456	first strand
Strand 2	D	40	45	anti-parallel
Strand 3	D	2	6	parallel
Strand 4	D	79	83	parallel
Strand 5	D	108	113	parallel
Strand 6	D	176	182	parallel
Strand 7	D	242	246	parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	230	237	first strand
Strand 2	D	216	223	anti-parallel
Strand 3	D	436	444	parallel
Strand 4	D	325	334	parallel
Strand 5	D	376	381	anti-parallel
Strand 6	D	363	368	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	308	312	first strand
Strand 2	D	317	321	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	345	349	first strand
Strand 2	D	398	402	anti-parallel
Strand 3	D	419	423	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	414	415	first strand
Strand 2	D	447	448	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZTH

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZTH