Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZU0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZU0 entry

There are 6 chains in PDB entry 6ZU0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 3	ARG 427
B	ASP 3	ARG 427
C	ASP 3	GLY 428
D	ASP 3	ASP 426
E	ASP 3	LYS 425
F	LYS 5	ASP 426

There are130 helices in PDB entry 6ZU0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	38	Right-handed 310
Helix 2	AA2	A	45	48	Right-handed 310
Helix 3	AA3	A	74	80	Right-handed alpha
Helix 4	AA4	A	82	93	Right-handed alpha
Helix 5	AA5	A	97	111	Right-handed alpha
Helix 6	AA6	A	116	123	Right-handed alpha
Helix 7	AA7	A	130	146	Right-handed alpha
Helix 8	AA8	A	154	182	Right-handed alpha
Helix 9	AA9	A	193	204	Right-handed alpha
Helix 10	AB1	A	213	226	Right-handed alpha
Helix 11	AB2	A	233	244	Right-handed alpha
Helix 12	AB3	A	248	262	Right-handed alpha
Helix 13	AB4	A	262	267	Right-handed alpha
Helix 14	AB5	A	267	280	Right-handed alpha
Helix 15	AB6	A	281	283	Right-handed 310
Helix 16	AB7	A	284	294	Right-handed alpha
Helix 17	AB8	A	315	331	Right-handed alpha
Helix 18	AB9	A	334	350	Right-handed alpha
Helix 19	AC1	A	350	356	Right-handed alpha
Helix 20	AC2	A	361	373	Right-handed alpha
Helix 21	AC3	A	376	378	Right-handed 310
Helix 22	AC4	A	379	402	Right-handed alpha
Helix 23	AC5	A	423	427	Right-handed 310
Helix 24	AC6	B	34	38	Right-handed 310
Helix 25	AC7	B	45	48	Right-handed 310
Helix 26	AC8	B	74	80	Right-handed alpha
Helix 27	AC9	B	82	93	Right-handed alpha
Helix 28	AD1	B	97	111	Right-handed alpha
Helix 29	AD2	B	116	123	Right-handed alpha
Helix 30	AD3	B	130	146	Right-handed alpha
Helix 31	AD4	B	154	182	Right-handed alpha
Helix 32	AD5	B	193	204	Right-handed alpha
Helix 33	AD6	B	213	226	Right-handed alpha
Helix 34	AD7	B	233	244	Right-handed alpha
Helix 35	AD8	B	248	262	Right-handed alpha
Helix 36	AD9	B	262	267	Right-handed alpha
Helix 37	AE1	B	267	280	Right-handed alpha
Helix 38	AE2	B	281	283	Right-handed 310
Helix 39	AE3	B	284	294	Right-handed alpha
Helix 40	AE4	B	313	331	Right-handed alpha
Helix 41	AE5	B	334	350	Right-handed alpha
Helix 42	AE6	B	350	356	Right-handed alpha
Helix 43	AE7	B	361	373	Right-handed alpha
Helix 44	AE8	B	376	378	Right-handed 310
Helix 45	AE9	B	379	402	Right-handed alpha
Helix 46	AF1	C	34	38	Right-handed 310
Helix 47	AF2	C	45	48	Right-handed 310
Helix 48	AF3	C	74	80	Right-handed alpha
Helix 49	AF4	C	82	93	Right-handed alpha
Helix 50	AF5	C	97	111	Right-handed alpha
Helix 51	AF6	C	116	123	Right-handed alpha
Helix 52	AF7	C	130	146	Right-handed alpha
Helix 53	AF8	C	154	182	Right-handed alpha
Helix 54	AF9	C	193	204	Right-handed alpha
Helix 55	AG1	C	213	226	Right-handed alpha
Helix 56	AG2	C	233	244	Right-handed alpha
Helix 57	AG3	C	248	262	Right-handed alpha
Helix 58	AG4	C	267	280	Right-handed alpha
Helix 59	AG5	C	284	294	Right-handed alpha
Helix 60	AG6	C	313	331	Right-handed alpha
Helix 61	AG7	C	334	350	Right-handed alpha
Helix 62	AG8	C	350	356	Right-handed alpha
Helix 63	AG9	C	361	373	Right-handed alpha
Helix 64	AH1	C	376	378	Right-handed 310
Helix 65	AH2	C	379	402	Right-handed alpha
Helix 66	AH3	C	423	427	Right-handed 310
Helix 67	AH4	D	34	38	Right-handed 310
Helix 68	AH5	D	45	48	Right-handed 310
Helix 69	AH6	D	74	80	Right-handed alpha
Helix 70	AH7	D	82	93	Right-handed alpha
Helix 71	AH8	D	97	111	Right-handed alpha
Helix 72	AH9	D	116	123	Right-handed alpha
Helix 73	AI1	D	130	146	Right-handed alpha
Helix 74	AI2	D	154	182	Right-handed alpha
Helix 75	AI3	D	193	204	Right-handed alpha
Helix 76	AI4	D	213	226	Right-handed alpha
Helix 77	AI5	D	233	244	Right-handed alpha
Helix 78	AI6	D	248	262	Right-handed alpha
Helix 79	AI7	D	267	280	Right-handed alpha
Helix 80	AI8	D	281	283	Right-handed 310
Helix 81	AI9	D	284	294	Right-handed alpha
Helix 82	AJ1	D	313	331	Right-handed alpha
Helix 83	AJ2	D	334	350	Right-handed alpha
Helix 84	AJ3	D	350	356	Right-handed alpha
Helix 85	AJ4	D	361	373	Right-handed alpha
Helix 86	AJ5	D	376	378	Right-handed 310
Helix 87	AJ6	D	379	402	Right-handed alpha
Helix 88	AJ7	E	34	38	Right-handed 310
Helix 89	AJ8	E	45	48	Right-handed 310
Helix 90	AJ9	E	74	80	Right-handed alpha
Helix 91	AK1	E	82	93	Right-handed alpha
Helix 92	AK2	E	97	112	Right-handed alpha
Helix 93	AK3	E	116	123	Right-handed alpha
Helix 94	AK4	E	130	146	Right-handed alpha
Helix 95	AK5	E	154	182	Right-handed alpha
Helix 96	AK6	E	193	204	Right-handed alpha
Helix 97	AK7	E	213	226	Right-handed alpha
Helix 98	AK8	E	233	244	Right-handed alpha
Helix 99	AK9	E	248	262	Right-handed alpha
Helix 100	AL1	E	267	280	Right-handed alpha
Helix 101	AL2	E	281	283	Right-handed 310
Helix 102	AL3	E	284	294	Right-handed alpha
Helix 103	AL4	E	313	331	Right-handed alpha
Helix 104	AL5	E	334	350	Right-handed alpha
Helix 105	AL6	E	350	356	Right-handed alpha
Helix 106	AL7	E	361	373	Right-handed alpha
Helix 107	AL8	E	376	378	Right-handed 310
Helix 108	AL9	E	379	402	Right-handed alpha
Helix 109	AM1	F	34	38	Right-handed 310
Helix 110	AM2	F	45	48	Right-handed 310
Helix 111	AM3	F	74	80	Right-handed alpha
Helix 112	AM4	F	82	93	Right-handed alpha
Helix 113	AM5	F	97	111	Right-handed alpha
Helix 114	AM6	F	116	123	Right-handed alpha
Helix 115	AM7	F	130	146	Right-handed alpha
Helix 116	AM8	F	154	182	Right-handed alpha
Helix 117	AM9	F	193	204	Right-handed alpha
Helix 118	AN1	F	213	226	Right-handed alpha
Helix 119	AN2	F	233	244	Right-handed alpha
Helix 120	AN3	F	248	262	Right-handed alpha
Helix 121	AN4	F	262	267	Right-handed alpha
Helix 122	AN5	F	267	280	Right-handed alpha
Helix 123	AN6	F	281	283	Right-handed 310
Helix 124	AN7	F	284	294	Right-handed alpha
Helix 125	AN8	F	313	331	Right-handed alpha
Helix 126	AN9	F	334	350	Right-handed alpha
Helix 127	AO1	F	350	356	Right-handed alpha
Helix 128	AO2	F	361	373	Right-handed alpha
Helix 129	AO3	F	376	378	Right-handed 310
Helix 130	AO4	F	379	402	Right-handed alpha

There are 10 sheets in PDB entry 6ZU0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	410	413	first strand
Strand 2	B	50	55	parallel
Strand 3	A	40	43	parallel
Strand 4	B	28	31	parallel
Strand 5	B	16	21	anti-parallel
Strand 6	B	4	9	anti-parallel
Strand 7	A	4	9	anti-parallel
Strand 8	A	16	21	anti-parallel
Strand 9	A	28	31	anti-parallel
Strand 10	B	40	43	parallel
Strand 11	A	50	55	parallel
Strand 12	B	410	413	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	61	first strand
Strand 2	A	66	69	anti-parallel
Strand 3	A	72	73	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	61	first strand
Strand 2	B	66	69	anti-parallel
Strand 3	B	72	73	anti-parallel

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There are 12 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	410	413	first strand
Strand 2	D	50	55	parallel
Strand 3	C	40	43	parallel
Strand 4	D	28	31	parallel
Strand 5	D	16	21	anti-parallel
Strand 6	D	5	10	anti-parallel
Strand 7	C	4	9	anti-parallel
Strand 8	C	16	21	anti-parallel
Strand 9	C	28	31	anti-parallel
Strand 10	D	40	43	parallel
Strand 11	C	50	55	parallel
Strand 12	D	410	413	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	61	first strand
Strand 2	C	66	69	anti-parallel
Strand 3	C	72	73	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	61	first strand
Strand 2	D	66	69	anti-parallel
Strand 3	D	72	73	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	16	18	first strand
Strand 2	F	6	10	anti-parallel
Strand 3	E	4	9	anti-parallel
Strand 4	E	16	21	anti-parallel
Strand 5	E	28	31	anti-parallel
Strand 6	F	40	43	parallel
Strand 7	E	50	55	parallel
Strand 8	F	410	413	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	410	413	first strand
Strand 2	F	50	55	parallel
Strand 3	E	40	43	parallel
Strand 4	F	28	31	parallel
Strand 5	F	20	21	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	58	61	first strand
Strand 2	E	66	69	anti-parallel
Strand 3	E	72	73	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	61	first strand
Strand 2	F	66	69	anti-parallel
Strand 3	F	72	73	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZU0

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZU0