Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZX9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZX9 entry

There are 2 chains in PDB entry 6ZX9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY -1	HIS 1140
B	ALA 1046	ALA 1200

There are 25 helices in PDB entry 6ZX9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	250	256	Right-handed 310
Helix 2	AA2	A	755	759	Right-handed 310
Helix 3	AA3	A	985	990	Right-handed alpha
Helix 4	AA4	A	1044	1062	Right-handed alpha
Helix 5	AA5	A	1069	1074	Right-handed alpha
Helix 6	AA6	A	1091	1096	Right-handed alpha
Helix 7	AA7	A	1097	1100	Right-handed 310
Helix 8	AA8	A	1101	1110	Right-handed alpha
Helix 9	AA9	A	1125	1138	Right-handed alpha
Helix 10	AB1	B	1049	1060	Right-handed alpha
Helix 11	AB2	B	1068	1077	Right-handed alpha
Helix 12	AB3	B	1292	1295	Right-handed 310
Helix 13	AB4	C	-164	-156	Right-handed alpha
Helix 14	AB5	C	-129	-117	Right-handed alpha
Helix 15	AB6	C	-108	-87	Right-handed alpha
Helix 16	AB7	C	-83	-77	Right-handed alpha
Helix 17	AB8	C	-75	-55	Right-handed alpha
Helix 18	AB9	C	-53	-44	Right-handed alpha
Helix 19	AC1	C	-42	-33	Right-handed alpha
Helix 20	AC2	C	-31	-25	Right-handed alpha
Helix 21	AC3	C	-25	-11	Right-handed alpha
Helix 22	AC4	C	-9	-5	Right-handed 310
Helix 23	AC5	C	20	37	Right-handed alpha
Helix 24	AC6	C	40	53	Right-handed alpha
Helix 25	AC7	C	61	88	Right-handed alpha

There are 31 sheets in PDB entry 6ZX9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1004	1009	first strand
Strand 2	A	1025	1032	anti-parallel
Strand 3	A	1037	1042	anti-parallel
Strand 4	A	4	10	anti-parallel
Strand 5	A	1088	1090	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	21	first strand
Strand 2	A	30	35	anti-parallel
Strand 3	A	38	44	anti-parallel
Strand 4	A	49	56	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	67	first strand
Strand 2	A	76	81	anti-parallel
Strand 3	A	85	94	anti-parallel
Strand 4	A	97	107	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	121	124	first strand
Strand 2	A	130	134	anti-parallel
Strand 3	A	139	144	anti-parallel
Strand 4	A	155	158	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	164	169	first strand
Strand 2	A	177	184	anti-parallel
Strand 3	A	187	196	anti-parallel
Strand 4	A	201	204	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	164	169	first strand
Strand 2	A	177	184	anti-parallel
Strand 3	A	187	196	anti-parallel
Strand 4	A	210	212	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	218	221	first strand
Strand 2	A	229	232	anti-parallel
Strand 3	A	237	240	anti-parallel
Strand 4	A	245	248	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	258	263	first strand
Strand 2	A	270	275	anti-parallel
Strand 3	A	279	287	anti-parallel
Strand 4	A	297	307	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	318	first strand
Strand 2	A	321	325	anti-parallel
Strand 3	A	331	336	anti-parallel
Strand 4	A	347	353	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	359	365	first strand
Strand 2	A	374	379	anti-parallel
Strand 3	A	386	393	anti-parallel
Strand 4	A	709	716	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	396	402	first strand
Strand 2	A	699	704	anti-parallel
Strand 3	A	690	694	anti-parallel
Strand 4	A	678	682	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	407	412	first strand
Strand 2	A	424	429	anti-parallel
Strand 3	A	432	437	anti-parallel
Strand 4	A	444	446	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	457	463	first strand
Strand 2	A	467	472	anti-parallel
Strand 3	A	475	480	anti-parallel
Strand 4	A	486	490	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	500	503	first strand
Strand 2	A	507	512	anti-parallel
Strand 3	A	515	522	anti-parallel
Strand 4	A	525	533	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	538	542	first strand
Strand 2	A	555	560	anti-parallel
Strand 3	A	565	570	anti-parallel
Strand 4	A	575	581	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	588	595	first strand
Strand 2	A	600	606	anti-parallel
Strand 3	A	610	616	anti-parallel
Strand 4	A	623	630	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	637	642	first strand
Strand 2	A	647	652	anti-parallel
Strand 3	A	657	662	anti-parallel
Strand 4	A	665	670	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	720	727	first strand
Strand 2	A	732	743	anti-parallel
Strand 3	A	749	751	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	720	727	first strand
Strand 2	A	732	743	anti-parallel
Strand 3	A	785	795	anti-parallel
Strand 4	A	801	806	anti-parallel
Strand 5	A	762	765	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	811	819	first strand
Strand 2	A	828	835	anti-parallel
Strand 3	A	846	854	anti-parallel
Strand 4	A	857	866	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	870	876	first strand
Strand 2	A	879	884	anti-parallel
Strand 3	A	887	893	anti-parallel
Strand 4	A	899	905	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	911	917	first strand
Strand 2	A	920	925	anti-parallel
Strand 3	A	930	935	anti-parallel
Strand 4	A	942	948	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	954	961	first strand
Strand 2	A	964	969	anti-parallel
Strand 3	A	973	978	anti-parallel
Strand 4	A	993	999	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1076	1077	first strand
Strand 2	A	1082	1083	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1080	1086	first strand
Strand 2	B	1382	1389	anti-parallel
Strand 3	B	1365	1371	anti-parallel
Strand 4	B	1344	1359	anti-parallel
Strand 5	B	1331	1338	anti-parallel
Strand 6	B	1307	1311	anti-parallel
Strand 7	B	1298	1301	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1096	1101	first strand
Strand 2	B	1107	1112	anti-parallel
Strand 3	B	1116	1121	anti-parallel
Strand 4	B	1127	1132	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1140	1143	first strand
Strand 2	B	1149	1153	anti-parallel
Strand 3	B	1161	1165	anti-parallel
Strand 4	B	1172	1175	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1181	1184	first strand
Strand 2	B	1191	1196	anti-parallel
Strand 3	B	1199	1204	anti-parallel
Strand 4	B	1210	1214	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1229	1230	first strand
Strand 2	B	1236	1239	anti-parallel
Strand 3	B	1242	1245	anti-parallel
Strand 4	B	1250	1254	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1265	1266	first strand
Strand 2	B	1272	1275	anti-parallel
Strand 3	B	1278	1281	anti-parallel
Strand 4	B	1287	1290	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	-153	-148	first strand
Strand 2	C	-142	-139	anti-parallel
Strand 3	C	-136	-133	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZX9

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZX9