Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZXW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZXW entry

There are 2 chains in PDB entry 6ZXW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	MET 1	HIS 321
H	MET 1	GLU 57

There are 13 helices in PDB entry 6ZXW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	11	26	Right-handed alpha
Helix 2	AA2	G	48	52	Right-handed 310
Helix 3	AA3	G	66	68	Right-handed 310
Helix 4	AA4	G	69	77	Right-handed alpha
Helix 5	AA5	G	93	107	Right-handed alpha
Helix 6	AA6	G	141	146	Right-handed alpha
Helix 7	AA7	G	147	152	Right-handed 310
Helix 8	AA8	G	161	172	Right-handed alpha
Helix 9	AA9	G	188	197	Right-handed alpha
Helix 10	AB1	G	207	222	Right-handed alpha
Helix 11	AB2	G	254	258	Right-handed 310
Helix 12	AB3	G	261	275	Right-handed alpha
Helix 13	AB4	H	2	8	Right-handed 310

There are 3 sheets in PDB entry 6ZXW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	27	35	first strand
Strand 2	G	38	45	anti-parallel
Strand 3	G	2	7	anti-parallel
Strand 4	G	55	65	anti-parallel
Strand 5	G	129	138	anti-parallel
Strand 6	G	119	126	anti-parallel
Strand 7	G	84	89	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	226	229	first strand
Strand 2	G	200	205	parallel
Strand 3	G	179	182	parallel
Strand 4	G	242	248	parallel
Strand 5	G	276	286	parallel
Strand 6	G	312	320	anti-parallel
Strand 7	G	297	306	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	18	25	first strand
Strand 2	H	30	37	anti-parallel
Strand 3	H	43	47	anti-parallel
Strand 4	H	50	51	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZXW

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZXW