Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZY2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZY2 entry

There are 12 chains in PDB entry 6ZY2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	TYR 152
D	MET 1	TYR 152
I	MET 1	TYR 152
J	MET 1	TYR 152
K	MET 1	TYR 152
L	MET 1	TYR 152
B	SER 4	HIS 98
C	GLU 3	HIS 98
F	ASN 7	PRO 267
G	ALA 6	PRO 267
E	MET 1	GLY 259
H	MET 1	GLY 259

There are 67 helices in PDB entry 6ZY2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	27	Right-handed alpha
Helix 2	AA2	A	142	152	Right-handed alpha
Helix 3	AA3	D	4	25	Right-handed alpha
Helix 4	AA4	D	142	147	Right-handed alpha
Helix 5	AA5	D	147	152	Right-handed alpha
Helix 6	AA6	I	7	25	Right-handed alpha
Helix 7	AA7	I	144	151	Right-handed alpha
Helix 8	AA8	J	5	29	Right-handed alpha
Helix 9	AA9	J	142	152	Right-handed alpha
Helix 10	AB1	K	2	20	Right-handed alpha
Helix 11	AB2	K	145	152	Right-handed alpha
Helix 12	AB3	L	6	19	Right-handed alpha
Helix 13	AB4	L	142	152	Right-handed alpha
Helix 14	AB5	B	25	31	Right-handed alpha
Helix 15	AB6	B	35	39	Right-handed 310
Helix 16	AB7	B	51	67	Right-handed alpha
Helix 17	AB8	B	78	88	Right-handed alpha
Helix 18	AB9	C	25	30	Right-handed alpha
Helix 19	AC1	C	51	67	Right-handed alpha
Helix 20	AC2	C	78	88	Right-handed alpha
Helix 21	AC3	F	51	56	Right-handed alpha
Helix 22	AC4	F	79	87	Right-handed 310
Helix 23	AC5	F	101	107	Right-handed alpha
Helix 24	AC6	F	117	125	Right-handed alpha
Helix 25	AC7	F	128	133	Right-handed alpha
Helix 26	AC8	F	141	145	Right-handed 310
Helix 27	AC9	F	148	159	Right-handed alpha
Helix 28	AD1	F	176	193	Right-handed alpha
Helix 29	AD2	F	204	209	Right-handed alpha
Helix 30	AD3	F	240	244	Right-handed 310
Helix 31	AD4	F	260	266	Right-handed alpha
Helix 32	AD5	G	47	56	Right-handed alpha
Helix 33	AD6	G	76	85	Right-handed alpha
Helix 34	AD7	G	101	107	Right-handed alpha
Helix 35	AD8	G	117	130	Right-handed alpha
Helix 36	AD9	G	141	145	Right-handed 310
Helix 37	AE1	G	146	154	Right-handed alpha
Helix 38	AE2	G	154	159	Right-handed alpha
Helix 39	AE3	G	176	195	Right-handed alpha
Helix 40	AE4	G	239	244	Right-handed alpha
Helix 41	AE5	G	260	265	Right-handed alpha
Helix 42	AE6	E	6	29	Right-handed alpha
Helix 43	AE7	E	40	51	Right-handed alpha
Helix 44	AE8	E	55	73	Right-handed alpha
Helix 45	AE9	E	88	95	Right-handed alpha
Helix 46	AF1	E	99	112	Right-handed alpha
Helix 47	AF2	E	113	126	Right-handed alpha
Helix 48	AF3	E	128	134	Right-handed alpha
Helix 49	AF4	E	144	153	Right-handed alpha
Helix 50	AF5	E	154	168	Right-handed alpha
Helix 51	AF6	E	185	189	Right-handed 310
Helix 52	AF7	E	199	220	Right-handed alpha
Helix 53	AF8	E	227	256	Right-handed alpha
Helix 54	AF9	H	9	32	Right-handed alpha
Helix 55	AG1	H	40	47	Right-handed alpha
Helix 56	AG2	H	55	78	Right-handed alpha
Helix 57	AG3	H	83	86	Right-handed 310
Helix 58	AG4	H	87	92	Right-handed alpha
Helix 59	AG5	H	102	126	Right-handed alpha
Helix 60	AG6	H	127	132	Right-handed alpha
Helix 61	AG7	H	133	136	Right-handed 310
Helix 62	AG8	H	138	143	Right-handed alpha
Helix 63	AG9	H	144	153	Right-handed alpha
Helix 64	AH1	H	154	175	Right-handed alpha
Helix 65	AH2	H	198	223	Right-handed alpha
Helix 66	AH3	H	227	247	Right-handed alpha
Helix 67	AH4	H	249	256	Right-handed alpha

There are 23 sheets in PDB entry 6ZY2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	45	first strand
Strand 2	A	80	86	anti-parallel
Strand 3	A	71	73	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	66	first strand
Strand 2	A	58	59	anti-parallel
Strand 3	A	110	115	parallel
Strand 4	A	98	103	anti-parallel
Strand 5	A	137	138	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	81	86	first strand
Strand 2	D	63	72	anti-parallel
Strand 3	D	57	60	anti-parallel
Strand 4	D	110	115	parallel
Strand 5	D	98	103	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	68	73	first strand
Strand 2	I	80	85	anti-parallel
Strand 3	I	41	45	anti-parallel
Strand 4	I	133	134	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	58	59	first strand
Strand 2	I	64	66	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	99	103	first strand
Strand 2	I	110	114	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	39	41	first strand
Strand 2	J	80	87	anti-parallel
Strand 3	J	44	45	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	39	41	first strand
Strand 2	J	80	87	anti-parallel
Strand 3	J	68	73	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	63	66	first strand
Strand 2	J	58	60	anti-parallel
Strand 3	J	110	115	parallel
Strand 4	J	98	103	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	71	73	first strand
Strand 2	K	80	82	anti-parallel
Strand 3	K	43	45	anti-parallel
Strand 4	K	133	134	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	85	86	first strand
Strand 2	K	63	67	anti-parallel
Strand 3	K	58	60	anti-parallel
Strand 4	K	110	114	parallel
Strand 5	K	99	103	anti-parallel
Strand 6	K	137	138	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	39	41	first strand
Strand 2	L	80	87	anti-parallel
Strand 3	L	68	73	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	39	41	first strand
Strand 2	L	80	87	anti-parallel
Strand 3	L	43	45	anti-parallel
Strand 4	L	133	134	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	64	66	first strand
Strand 2	L	58	60	anti-parallel
Strand 3	L	110	114	parallel
Strand 4	L	102	103	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	6	10	first strand
Strand 2	B	13	20	anti-parallel
Strand 3	B	47	50	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	43	first strand
Strand 2	B	74	75	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	43	first strand
Strand 2	C	73	75	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	27	30	first strand
Strand 2	F	9	14	anti-parallel
Strand 3	F	65	67	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	165	168	first strand
Strand 2	F	197	200	parallel
Strand 3	F	36	38	parallel
Strand 4	F	214	215	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	218	219	first strand
Strand 2	F	222	223	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	16	17	first strand
Strand 2	G	22	24	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	165	168	first strand
Strand 2	G	197	200	parallel
Strand 3	G	37	40	parallel
Strand 4	G	214	218	parallel
Strand 5	G	223	225	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	66	67	first strand
Strand 2	G	70	71	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZY2

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZY2