Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZY6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZY6 entry

There are 6 chains in PDB entry 6ZY6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 433	ARG 1215
B	ASN 433	ARG 1215
D	C 1	C 17
E	G 1	G 13
F	C 1	C 17
C	G 1	G 13

There are 62 helices in PDB entry 6ZY6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	463	477	Right-handed alpha
Helix 2	AA2	A	497	502	Right-handed alpha
Helix 3	AA3	A	504	515	Right-handed alpha
Helix 4	AA4	A	524	531	Right-handed alpha
Helix 5	AA5	A	544	559	Right-handed alpha
Helix 6	AA6	A	562	567	Right-handed 310
Helix 7	AA7	A	591	602	Right-handed alpha
Helix 8	AA8	A	620	630	Right-handed alpha
Helix 9	AA9	A	630	635	Right-handed alpha
Helix 10	AB1	A	643	652	Right-handed alpha
Helix 11	AB2	A	657	679	Right-handed alpha
Helix 12	AB3	A	694	702	Right-handed alpha
Helix 13	AB4	A	702	715	Right-handed alpha
Helix 14	AB5	A	723	736	Right-handed alpha
Helix 15	AB6	A	744	755	Right-handed alpha
Helix 16	AB7	A	761	773	Right-handed alpha
Helix 17	AB8	A	813	818	Right-handed alpha
Helix 18	AB9	A	819	825	Right-handed 310
Helix 19	AC1	A	847	852	Right-handed alpha
Helix 20	AC2	A	869	882	Right-handed alpha
Helix 21	AC3	A	931	945	Right-handed alpha
Helix 22	AC4	A	973	984	Right-handed alpha
Helix 23	AC5	A	984	989	Right-handed alpha
Helix 24	AC6	A	1014	1038	Right-handed alpha
Helix 25	AC7	A	1039	1061	Right-handed alpha
Helix 26	AC8	A	1069	1080	Right-handed alpha
Helix 27	AC9	A	1085	1093	Right-handed alpha
Helix 28	AD1	A	1125	1129	Right-handed 310
Helix 29	AD2	A	1132	1136	Right-handed 310
Helix 30	AD3	A	1137	1161	Right-handed alpha
Helix 31	AD4	A	1165	1192	Right-handed alpha
Helix 32	AD5	B	463	477	Right-handed alpha
Helix 33	AD6	B	497	502	Right-handed alpha
Helix 34	AD7	B	504	515	Right-handed alpha
Helix 35	AD8	B	524	531	Right-handed alpha
Helix 36	AD9	B	544	559	Right-handed alpha
Helix 37	AE1	B	562	567	Right-handed 310
Helix 38	AE2	B	591	602	Right-handed alpha
Helix 39	AE3	B	620	630	Right-handed alpha
Helix 40	AE4	B	630	635	Right-handed alpha
Helix 41	AE5	B	643	652	Right-handed alpha
Helix 42	AE6	B	657	679	Right-handed alpha
Helix 43	AE7	B	694	702	Right-handed alpha
Helix 44	AE8	B	702	715	Right-handed alpha
Helix 45	AE9	B	723	736	Right-handed alpha
Helix 46	AF1	B	744	755	Right-handed alpha
Helix 47	AF2	B	761	773	Right-handed alpha
Helix 48	AF3	B	813	818	Right-handed alpha
Helix 49	AF4	B	819	825	Right-handed 310
Helix 50	AF5	B	847	852	Right-handed alpha
Helix 51	AF6	B	869	882	Right-handed alpha
Helix 52	AF7	B	931	945	Right-handed alpha
Helix 53	AF8	B	973	984	Right-handed alpha
Helix 54	AF9	B	984	989	Right-handed alpha
Helix 55	AG1	B	1014	1038	Right-handed alpha
Helix 56	AG2	B	1039	1061	Right-handed alpha
Helix 57	AG3	B	1069	1080	Right-handed alpha
Helix 58	AG4	B	1085	1093	Right-handed alpha
Helix 59	AG5	B	1125	1129	Right-handed 310
Helix 60	AG6	B	1132	1136	Right-handed 310
Helix 61	AG7	B	1137	1161	Right-handed alpha
Helix 62	AG8	B	1165	1192	Right-handed alpha

There are 16 sheets in PDB entry 6ZY6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	482	485	first strand
Strand 2	A	456	460	parallel
Strand 3	A	535	539	parallel
Strand 4	A	570	573	parallel
Strand 5	A	636	637	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	586	589	first strand
Strand 2	A	578	581	anti-parallel
Strand 3	A	609	612	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	742	743	first strand
Strand 2	A	807	808	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	830	831	first strand
Strand 2	A	834	835	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	854	856	first strand
Strand 2	A	861	863	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	899	900	first strand
Strand 2	A	906	909	anti-parallel
Strand 3	A	993	996	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	912	914	first strand
Strand 2	A	920	925	anti-parallel
Strand 3	A	970	971	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1001	1003	first strand
Strand 2	A	1009	1011	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	482	485	first strand
Strand 2	B	456	460	parallel
Strand 3	B	535	539	parallel
Strand 4	B	570	573	parallel
Strand 5	B	636	637	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	586	589	first strand
Strand 2	B	578	581	anti-parallel
Strand 3	B	609	612	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	742	743	first strand
Strand 2	B	807	808	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	830	831	first strand
Strand 2	B	834	835	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	854	856	first strand
Strand 2	B	861	863	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	899	900	first strand
Strand 2	B	906	909	anti-parallel
Strand 3	B	993	996	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	912	914	first strand
Strand 2	B	920	925	anti-parallel
Strand 3	B	970	971	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1001	1003	first strand
Strand 2	B	1009	1011	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZY6

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZY6