Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZY7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZY7 entry

There are 6 chains in PDB entry 6ZY7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	SER 29	ARG 1215
D	C 1	C 17
E	G 1	G 13
F	C 1	C 17
C	G 1	G 13
A	SER 29	ARG 1215

There are 87 helices in PDB entry 6ZY7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	38	46	Right-handed alpha
Helix 2	AA2	B	78	99	Right-handed alpha
Helix 3	AA3	B	165	173	Right-handed alpha
Helix 4	AA4	B	223	227	Right-handed 310
Helix 5	AA5	B	232	250	Right-handed alpha
Helix 6	AA6	B	265	275	Right-handed alpha
Helix 7	AA7	B	324	342	Right-handed alpha
Helix 8	AA8	B	343	345	Right-handed 310
Helix 9	AA9	B	355	359	Right-handed 310
Helix 10	AB1	B	384	388	Right-handed 310
Helix 11	AB2	B	395	403	Right-handed alpha
Helix 12	AB3	B	407	431	Right-handed alpha
Helix 13	AB4	B	463	477	Right-handed alpha
Helix 14	AB5	B	497	504	Right-handed alpha
Helix 15	AB6	B	504	515	Right-handed alpha
Helix 16	AB7	B	524	531	Right-handed alpha
Helix 17	AB8	B	543	561	Right-handed alpha
Helix 18	AB9	B	562	567	Right-handed 310
Helix 19	AC1	B	591	602	Right-handed alpha
Helix 20	AC2	B	615	619	Right-handed 310
Helix 21	AC3	B	620	630	Right-handed alpha
Helix 22	AC4	B	630	635	Right-handed alpha
Helix 23	AC5	B	643	653	Right-handed alpha
Helix 24	AC6	B	657	679	Right-handed alpha
Helix 25	AC7	B	694	702	Right-handed alpha
Helix 26	AC8	B	702	714	Right-handed alpha
Helix 27	AC9	B	723	736	Right-handed alpha
Helix 28	AD1	B	744	755	Right-handed alpha
Helix 29	AD2	B	760	771	Right-handed alpha
Helix 30	AD3	B	813	818	Right-handed alpha
Helix 31	AD4	B	819	823	Right-handed 310
Helix 32	AD5	B	830	834	Right-handed 310
Helix 33	AD6	B	847	852	Right-handed alpha
Helix 34	AD7	B	868	882	Right-handed alpha
Helix 35	AD8	B	931	945	Right-handed alpha
Helix 36	AD9	B	973	984	Right-handed alpha
Helix 37	AE1	B	984	989	Right-handed alpha
Helix 38	AE2	B	1014	1028	Right-handed alpha
Helix 39	AE3	B	1029	1061	Right-handed alpha
Helix 40	AE4	B	1069	1080	Right-handed alpha
Helix 41	AE5	B	1085	1096	Right-handed alpha
Helix 42	AE6	B	1132	1136	Right-handed 310
Helix 43	AE7	B	1137	1161	Right-handed alpha
Helix 44	AE8	B	1162	1193	Right-handed alpha
Helix 45	AE9	A	30	34	Right-handed alpha
Helix 46	AF1	A	38	46	Right-handed alpha
Helix 47	AF2	A	78	99	Right-handed alpha
Helix 48	AF3	A	165	173	Right-handed alpha
Helix 49	AF4	A	232	250	Right-handed alpha
Helix 50	AF5	A	267	275	Right-handed alpha
Helix 51	AF6	A	323	343	Right-handed alpha
Helix 52	AF7	A	352	357	Right-handed alpha
Helix 53	AF8	A	384	388	Right-handed 310
Helix 54	AF9	A	395	402	Right-handed alpha
Helix 55	AG1	A	406	430	Right-handed alpha
Helix 56	AG2	A	463	477	Right-handed alpha
Helix 57	AG3	A	497	504	Right-handed alpha
Helix 58	AG4	A	504	515	Right-handed alpha
Helix 59	AG5	A	524	531	Right-handed alpha
Helix 60	AG6	A	543	561	Right-handed alpha
Helix 61	AG7	A	562	567	Right-handed 310
Helix 62	AG8	A	591	602	Right-handed alpha
Helix 63	AG9	A	615	619	Right-handed 310
Helix 64	AH1	A	620	630	Right-handed alpha
Helix 65	AH2	A	630	635	Right-handed alpha
Helix 66	AH3	A	643	653	Right-handed alpha
Helix 67	AH4	A	657	679	Right-handed alpha
Helix 68	AH5	A	694	702	Right-handed alpha
Helix 69	AH6	A	702	714	Right-handed alpha
Helix 70	AH7	A	723	736	Right-handed alpha
Helix 71	AH8	A	744	755	Right-handed alpha
Helix 72	AH9	A	760	771	Right-handed alpha
Helix 73	AI1	A	813	818	Right-handed alpha
Helix 74	AI2	A	819	823	Right-handed 310
Helix 75	AI3	A	830	834	Right-handed 310
Helix 76	AI4	A	847	852	Right-handed alpha
Helix 77	AI5	A	868	882	Right-handed alpha
Helix 78	AI6	A	931	945	Right-handed alpha
Helix 79	AI7	A	973	984	Right-handed alpha
Helix 80	AI8	A	984	989	Right-handed alpha
Helix 81	AI9	A	1014	1028	Right-handed alpha
Helix 82	AJ1	A	1029	1061	Right-handed alpha
Helix 83	AJ2	A	1069	1080	Right-handed alpha
Helix 84	AJ3	A	1085	1096	Right-handed alpha
Helix 85	AJ4	A	1132	1136	Right-handed 310
Helix 86	AJ5	A	1137	1161	Right-handed alpha
Helix 87	AJ6	A	1164	1193	Right-handed alpha

There are 26 sheets in PDB entry 6ZY7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	36	first strand
Strand 2	A	147	148	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	65	first strand
Strand 2	B	69	77	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	205	207	first strand
Strand 2	B	188	195	anti-parallel
Strand 3	B	174	183	anti-parallel
Strand 4	B	215	221	anti-parallel
Strand 5	B	115	120	anti-parallel
Strand 6	B	104	110	anti-parallel
Strand 7	B	254	257	parallel
Strand 8	B	260	261	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	129	130	first strand
Strand 2	B	135	136	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	147	148	first strand
Strand 2	A	35	36	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	290	294	first strand
Strand 2	B	297	300	anti-parallel
Strand 3	B	361	364	anti-parallel
Strand 4	B	309	311	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	322	323	first strand
Strand 2	B	380	381	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	483	485	first strand
Strand 2	B	458	460	parallel
Strand 3	B	536	539	parallel
Strand 4	B	570	573	parallel
Strand 5	B	636	637	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	588	589	first strand
Strand 2	B	578	579	anti-parallel
Strand 3	B	611	612	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	742	743	first strand
Strand 2	B	807	808	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	853	856	first strand
Strand 2	B	861	864	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	898	901	first strand
Strand 2	B	906	910	anti-parallel
Strand 3	B	993	996	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	956	959	first strand
Strand 2	B	968	971	anti-parallel
Strand 3	B	920	925	anti-parallel
Strand 4	B	912	915	anti-parallel
Strand 5	B	1203	1204	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1001	1002	first strand
Strand 2	B	1010	1011	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	65	first strand
Strand 2	A	69	77	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	188	193	first strand
Strand 2	A	174	183	anti-parallel
Strand 3	A	215	221	anti-parallel
Strand 4	A	115	120	anti-parallel
Strand 5	A	104	110	anti-parallel
Strand 6	A	254	257	parallel
Strand 7	A	260	261	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	130	first strand
Strand 2	A	135	136	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	290	294	first strand
Strand 2	A	297	300	anti-parallel
Strand 3	A	361	366	anti-parallel
Strand 4	A	309	310	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	290	294	first strand
Strand 2	A	297	300	anti-parallel
Strand 3	A	361	366	anti-parallel
Strand 4	A	313	314	parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	483	485	first strand
Strand 2	A	458	460	parallel
Strand 3	A	536	539	parallel
Strand 4	A	570	573	parallel
Strand 5	A	636	637	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	588	589	first strand
Strand 2	A	578	579	anti-parallel
Strand 3	A	611	612	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	742	743	first strand
Strand 2	A	807	808	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	853	856	first strand
Strand 2	A	861	864	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	898	901	first strand
Strand 2	A	906	910	anti-parallel
Strand 3	A	993	996	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	956	959	first strand
Strand 2	A	968	971	anti-parallel
Strand 3	A	920	925	anti-parallel
Strand 4	A	912	915	anti-parallel
Strand 5	A	1203	1204	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1001	1002	first strand
Strand 2	A	1010	1011	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZY7

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZY7