Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZZ6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZZ6 entry

There are 6 chains in PDB entry 6ZZ6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 2	ALA 1224
B	GLY 0	ARG 1222
C	THR 67	ALA 555
D	THR 221	GLN 1475
F	A 1	A 34
G	T 1	T 34

There are 82 helices in PDB entry 6ZZ6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	38	50	Right-handed alpha
Helix 2	AA2	A	54	58	Right-handed 310
Helix 3	AA3	A	127	138	Right-handed alpha
Helix 4	AA4	A	155	160	Right-handed alpha
Helix 5	AA5	A	161	174	Right-handed alpha
Helix 6	AA6	A	178	195	Right-handed alpha
Helix 7	AA7	A	1045	1084	Right-handed alpha
Helix 8	AA8	A	1130	1148	Right-handed alpha
Helix 9	AA9	A	1164	1179	Right-handed alpha
Helix 10	AB1	A	1194	1198	Right-handed 310
Helix 11	AB2	B	37	49	Right-handed alpha
Helix 12	AB3	B	57	65	Right-handed alpha
Helix 13	AB4	B	125	136	Right-handed alpha
Helix 14	AB5	B	150	157	Right-handed alpha
Helix 15	AB6	B	158	170	Right-handed alpha
Helix 16	AB7	B	171	228	Right-handed alpha
Helix 17	AB8	B	998	1060	Right-handed alpha
Helix 18	AB9	B	1127	1146	Right-handed alpha
Helix 19	AC1	B	1161	1176	Right-handed alpha
Helix 20	AC2	B	1213	1222	Right-handed alpha
Helix 21	AC3	C	69	103	Right-handed alpha
Helix 22	AC4	C	503	510	Right-handed alpha
Helix 23	AC5	C	520	538	Right-handed alpha
Helix 24	AC6	D	222	236	Right-handed alpha
Helix 25	AC7	D	251	262	Right-handed alpha
Helix 26	AC8	D	279	291	Right-handed alpha
Helix 27	AC9	D	305	322	Right-handed alpha
Helix 28	AD1	D	338	352	Right-handed alpha
Helix 29	AD2	D	356	373	Right-handed alpha
Helix 30	AD3	D	387	406	Right-handed alpha
Helix 31	AD4	D	409	420	Right-handed alpha
Helix 32	AD5	D	421	424	Right-handed 310
Helix 33	AD6	D	444	456	Right-handed alpha
Helix 34	AD7	D	459	466	Right-handed alpha
Helix 35	AD8	D	475	506	Right-handed alpha
Helix 36	AD9	D	510	524	Right-handed alpha
Helix 37	AE1	D	531	548	Right-handed alpha
Helix 38	AE2	D	555	579	Right-handed alpha
Helix 39	AE3	D	598	616	Right-handed alpha
Helix 40	AE4	D	618	634	Right-handed alpha
Helix 41	AE5	D	648	662	Right-handed alpha
Helix 42	AE6	D	679	688	Right-handed alpha
Helix 43	AE7	D	691	696	Right-handed alpha
Helix 44	AE8	D	696	709	Right-handed alpha
Helix 45	AE9	D	712	730	Right-handed alpha
Helix 46	AF1	D	736	749	Right-handed alpha
Helix 47	AF2	D	751	765	Right-handed alpha
Helix 48	AF3	D	768	770	Right-handed 310
Helix 49	AF4	D	771	778	Right-handed alpha
Helix 50	AF5	D	783	801	Right-handed alpha
Helix 51	AF6	D	803	817	Right-handed alpha
Helix 52	AF7	D	822	838	Right-handed alpha
Helix 53	AF8	D	838	845	Right-handed alpha
Helix 54	AF9	D	850	866	Right-handed alpha
Helix 55	AG1	D	870	883	Right-handed alpha
Helix 56	AG2	D	892	917	Right-handed alpha
Helix 57	AG3	D	928	942	Right-handed alpha
Helix 58	AG4	D	949	962	Right-handed alpha
Helix 59	AG5	D	967	981	Right-handed alpha
Helix 60	AG6	D	987	1001	Right-handed alpha
Helix 61	AG7	D	1006	1022	Right-handed alpha
Helix 62	AG8	D	1027	1049	Right-handed alpha
Helix 63	AG9	D	1060	1075	Right-handed alpha
Helix 64	AH1	D	1092	1104	Right-handed alpha
Helix 65	AH2	D	1110	1128	Right-handed alpha
Helix 66	AH3	D	1129	1133	Right-handed 310
Helix 67	AH4	D	1134	1147	Right-handed alpha
Helix 68	AH5	D	1151	1175	Right-handed alpha
Helix 69	AH6	D	1204	1212	Right-handed alpha
Helix 70	AH7	D	1212	1221	Right-handed alpha
Helix 71	AH8	D	1224	1242	Right-handed alpha
Helix 72	AH9	D	1245	1248	Right-handed 310
Helix 73	AI1	D	1249	1258	Right-handed alpha
Helix 74	AI2	D	1261	1286	Right-handed alpha
Helix 75	AI3	D	1286	1302	Right-handed alpha
Helix 76	AI4	D	1312	1320	Right-handed alpha
Helix 77	AI5	D	1325	1341	Right-handed alpha
Helix 78	AI6	D	1356	1368	Right-handed alpha
Helix 79	AI7	D	1373	1398	Right-handed alpha
Helix 80	AI8	D	1414	1434	Right-handed alpha
Helix 81	AI9	D	1449	1454	Right-handed alpha
Helix 82	AJ1	D	1467	1473	Right-handed alpha

There are 8 sheets in PDB entry 6ZZ6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	18	22	first strand
Strand 2	A	3	10	anti-parallel
Strand 3	A	92	100	anti-parallel
Strand 4	A	103	111	anti-parallel
Strand 5	A	117	121	anti-parallel
Strand 6	A	124	126	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	148	149	first strand
Strand 2	A	1153	1156	parallel
Strand 3	A	1184	1188	parallel
Strand 4	A	28	32	parallel
Strand 5	A	1200	1207	parallel
Strand 6	A	1212	1217	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1096	1101	first strand
Strand 2	A	1112	1117	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	114	117	first strand
Strand 2	B	104	109	anti-parallel
Strand 3	B	76	81	anti-parallel
Strand 4	B	5	9	anti-parallel
Strand 5	B	17	20	anti-parallel
Strand 6	D	1179	1181	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	145	146	first strand
Strand 2	B	1150	1154	parallel
Strand 3	B	1180	1184	parallel
Strand 4	B	27	31	parallel
Strand 5	B	1196	1202	parallel
Strand 6	B	1207	1212	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1067	1070	first strand
Strand 2	B	1106	1109	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	541	544	first strand
Strand 2	C	551	554	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	434	435	first strand
Strand 2	D	442	443	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZZ6

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZZ6