Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZZD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZZD entry

There are 4 chains in PDB entry 6ZZD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 11GLY 157
B
 GLN 12ASN 158
C
 GLU -8THR 93
D
 GLN -2THR 93
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6ZZD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
82 92Right-handed alpha
Helix 2
AA2
A
100 115Right-handed alpha
Helix 3
AA3
B
16 20Right-handed 310
Helix 4
AA4
B
82 92Right-handed alpha
Helix 5
AA5
B
100 115Right-handed alpha
Helix 6
AA6
C
-4 1Right-handed alpha
Helix 7
AA7
C
76 80Right-handed 310
Helix 8
AA8
D
-2 2Right-handed 310
Helix 9
AA9
D
76 80Right-handed 310
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There are 6 sheets in PDB entry 6ZZD. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 34first strand
Strand 2
A
40 52anti-parallel
Strand 3
A
60 67anti-parallel
Strand 4
A
75 81anti-parallel
Strand 5
A
146 156anti-parallel
Strand 6
A
134 141anti-parallel
Strand 7
A
122 129anti-parallel
Strand 8
A
21 34parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 34first strand
Strand 2
B
40 52anti-parallel
Strand 3
B
60 67anti-parallel
Strand 4
B
75 81anti-parallel
Strand 5
B
145 156anti-parallel
Strand 6
B
134 142anti-parallel
Strand 7
B
122 129anti-parallel
Strand 8
B
21 34parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 13first strand
Strand 2
C
18 23anti-parallel
Strand 3
C
56 59anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 51first strand
Strand 2
C
31 38anti-parallel
Strand 3
C
67 75anti-parallel
Strand 4
C
87 92anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 14first strand
Strand 2
D
17 23anti-parallel
Strand 3
D
56 59anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
46 51first strand
Strand 2
D
31 38anti-parallel
Strand 3
D
67 75anti-parallel
Strand 4
D
87 92anti-parallel
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