Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZZK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZZK entry

There are 2 chains in PDB entry 6ZZK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 436LEU 675
B
 GLY 435LEU 675
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6ZZK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
445 461Right-handed alpha
Helix 2
AA2
A
473 492Right-handed alpha
Helix 3
AA3
A
497 512Right-handed alpha
Helix 4
AA4
A
551 555Right-handed 310
Helix 5
AA5
A
556 573Right-handed alpha
Helix 6
AA6
A
577 582Right-handed 310
Helix 7
AA7
A
590 595Right-handed 310
Helix 8
AA8
A
649 667Right-handed alpha
Helix 9
AA9
A
670 674Right-handed 310
Helix 10
AB1
B
445 461Right-handed alpha
Helix 11
AB2
B
473 492Right-handed alpha
Helix 12
AB3
B
497 512Right-handed alpha
Helix 13
AB4
B
551 555Right-handed 310
Helix 14
AB5
B
556 573Right-handed alpha
Helix 15
AB6
B
577 582Right-handed 310
Helix 16
AB7
B
590 595Right-handed 310
Helix 17
AB8
B
649 667Right-handed alpha
Helix 18
AB9
B
670 674Right-handed 310
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There are 7 sheets in PDB entry 6ZZK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 472first strand
Strand 2
A
628 644anti-parallel
Strand 3
A
609 612anti-parallel
Strand 4
A
586 589parallel
Strand 5
A
534 536parallel
Strand 6
A
548 549anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 472first strand
Strand 2
A
628 644anti-parallel
Strand 3
A
617 625anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
517 520first strand
Strand 2
A
525 528anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
464 472first strand
Strand 2
B
628 644anti-parallel
Strand 3
B
609 612anti-parallel
Strand 4
B
586 589parallel
Strand 5
B
534 536parallel
Strand 6
B
548 549anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
464 472first strand
Strand 2
B
628 644anti-parallel
Strand 3
B
617 625anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
517 520first strand
Strand 2
B
525 528anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
538 540first strand
Strand 2
B
543 545anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il