Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZZL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZZL entry

There are 3 chains in PDB entry 6ZZL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 421	LEU 675
B	SER 423	LEU 675
C	SER 423	LEU 675

There are 29 helices in PDB entry 6ZZL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	431	437	Right-handed 310
Helix 2	AA2	A	445	461	Right-handed alpha
Helix 3	AA3	A	473	492	Right-handed alpha
Helix 4	AA4	A	497	512	Right-handed alpha
Helix 5	AA5	A	551	555	Right-handed 310
Helix 6	AA6	A	556	573	Right-handed alpha
Helix 7	AA7	A	578	582	Right-handed 310
Helix 8	AA8	A	590	595	Right-handed 310
Helix 9	AA9	A	649	667	Right-handed alpha
Helix 10	AB1	A	670	674	Right-handed 310
Helix 11	AB2	B	431	438	Right-handed 310
Helix 12	AB3	B	445	461	Right-handed alpha
Helix 13	AB4	B	473	492	Right-handed alpha
Helix 14	AB5	B	497	512	Right-handed alpha
Helix 15	AB6	B	551	555	Right-handed 310
Helix 16	AB7	B	556	573	Right-handed alpha
Helix 17	AB8	B	578	582	Right-handed 310
Helix 18	AB9	B	590	595	Right-handed 310
Helix 19	AC1	B	649	667	Right-handed alpha
Helix 20	AC2	C	431	438	Right-handed 310
Helix 21	AC3	C	445	461	Right-handed alpha
Helix 22	AC4	C	473	492	Right-handed alpha
Helix 23	AC5	C	497	512	Right-handed alpha
Helix 24	AC6	C	551	555	Right-handed 310
Helix 25	AC7	C	556	573	Right-handed alpha
Helix 26	AC8	C	578	582	Right-handed 310
Helix 27	AC9	C	590	595	Right-handed 310
Helix 28	AD1	C	649	667	Right-handed alpha
Helix 29	AD2	C	670	674	Right-handed 310

There are 12 sheets in PDB entry 6ZZL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	441	443	first strand
Strand 2	B	525	528	anti-parallel
Strand 3	B	517	520	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	464	472	first strand
Strand 2	A	628	644	anti-parallel
Strand 3	A	609	612	anti-parallel
Strand 4	A	586	589	parallel
Strand 5	A	534	536	parallel
Strand 6	A	548	549	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	464	472	first strand
Strand 2	A	628	644	anti-parallel
Strand 3	A	617	625	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	517	519	first strand
Strand 2	A	525	528	anti-parallel
Strand 3	C	441	443	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	538	540	first strand
Strand 2	A	543	545	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	441	443	first strand
Strand 2	C	525	528	anti-parallel
Strand 3	C	517	520	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	464	472	first strand
Strand 2	B	628	644	anti-parallel
Strand 3	B	609	612	anti-parallel
Strand 4	B	586	589	parallel
Strand 5	B	534	536	parallel
Strand 6	B	548	549	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	464	472	first strand
Strand 2	B	628	644	anti-parallel
Strand 3	B	617	625	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	538	540	first strand
Strand 2	B	543	545	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	464	472	first strand
Strand 2	C	628	644	anti-parallel
Strand 3	C	609	612	anti-parallel
Strand 4	C	586	589	parallel
Strand 5	C	534	536	parallel
Strand 6	C	548	549	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	464	472	first strand
Strand 2	C	628	644	anti-parallel
Strand 3	C	617	625	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	538	540	first strand
Strand 2	C	543	545	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZZL

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZZL