Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZZM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZZM entry

There are 2 chains in PDB entry 6ZZM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 430LEU 666
B
 ILE 429LEU 666
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6ZZM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
436 452Right-handed alpha
Helix 2
AA2
A
464 483Right-handed alpha
Helix 3
AA3
A
488 503Right-handed alpha
Helix 4
AA4
A
542 546Right-handed 310
Helix 5
AA5
A
547 564Right-handed alpha
Helix 6
AA6
A
568 573Right-handed 310
Helix 7
AA7
A
581 586Right-handed 310
Helix 8
AA8
A
640 658Right-handed alpha
Helix 9
AA9
A
660 665Right-handed alpha
Helix 10
AB1
B
436 452Right-handed alpha
Helix 11
AB2
B
464 483Right-handed alpha
Helix 12
AB3
B
488 503Right-handed alpha
Helix 13
AB4
B
542 546Right-handed 310
Helix 14
AB5
B
547 564Right-handed alpha
Helix 15
AB6
B
568 573Right-handed 310
Helix 16
AB7
B
581 586Right-handed 310
Helix 17
AB8
B
640 658Right-handed alpha
Helix 18
AB9
B
660 665Right-handed alpha
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There are 8 sheets in PDB entry 6ZZM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
455 458first strand
Strand 2
A
632 635anti-parallel
Strand 3
A
600 603anti-parallel
Strand 4
A
577 580parallel
Strand 5
A
525 527parallel
Strand 6
A
539 540anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 463first strand
Strand 2
A
620 629anti-parallel
Strand 3
A
608 615anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
508 511first strand
Strand 2
A
516 519anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
529 531first strand
Strand 2
A
534 536anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
455 458first strand
Strand 2
B
632 635anti-parallel
Strand 3
B
600 603anti-parallel
Strand 4
B
577 580parallel
Strand 5
B
525 527parallel
Strand 6
B
539 540anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
461 463first strand
Strand 2
B
619 629anti-parallel
Strand 3
B
608 616anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
508 511first strand
Strand 2
B
516 519anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
529 531first strand
Strand 2
B
534 536anti-parallel
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