Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZZO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ZZO entry

There are 4 chains in PDB entry 6ZZO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 2ASN 266
B
ALA 2ASN 266
C
ALA 2ASN 266
D
ALA 2ASN 266
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 6ZZO. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
21 34Right-handed alpha
Helix 2
AA2
A
44 58Right-handed alpha
Helix 3
AA3
A
71 87Right-handed alpha
Helix 4
AA4
A
108 135Right-handed alpha
Helix 5
AA5
A
136 139Right-handed 310
Helix 6
AA6
A
148 152Right-handed 310
Helix 7
AA7
A
158 180Right-handed alpha
Helix 8
AA8
A
217 221Right-handed alpha
Helix 9
AA9
A
233 246Right-handed alpha
Helix 10
AB1
B
21 34Right-handed alpha
Helix 11
AB2
B
44 58Right-handed alpha
Helix 12
AB3
B
71 87Right-handed alpha
Helix 13
AB4
B
108 135Right-handed alpha
Helix 14
AB5
B
136 139Right-handed 310
Helix 15
AB6
B
148 152Right-handed 310
Helix 16
AB7
B
158 180Right-handed alpha
Helix 17
AB8
B
196 201Right-handed alpha
Helix 18
AB9
B
233 247Right-handed alpha
Helix 19
AC1
C
21 34Right-handed alpha
Helix 20
AC2
C
44 58Right-handed alpha
Helix 21
AC3
C
71 87Right-handed alpha
Helix 22
AC4
C
108 135Right-handed alpha
Helix 23
AC5
C
136 139Right-handed 310
Helix 24
AC6
C
148 152Right-handed 310
Helix 25
AC7
C
158 180Right-handed alpha
Helix 26
AC8
C
196 211Right-handed alpha
Helix 27
AC9
C
213 221Right-handed alpha
Helix 28
AD1
C
233 246Right-handed alpha
Helix 29
AD2
D
21 34Right-handed alpha
Helix 30
AD3
D
44 58Right-handed alpha
Helix 31
AD4
D
71 87Right-handed alpha
Helix 32
AD5
D
108 135Right-handed alpha
Helix 33
AD6
D
136 139Right-handed 310
Helix 34
AD7
D
148 152Right-handed 310
Helix 35
AD8
D
158 180Right-handed alpha
Helix 36
AD9
D
196 201Right-handed alpha
Helix 37
AE1
D
201 208Right-handed alpha
Helix 38
AE2
D
213 221Right-handed alpha
Helix 39
AE3
D
233 247Right-handed alpha
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There are 4 sheets in PDB entry 6ZZO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
61 66first strand
Strand 2
A
37 42parallel
Strand 3
A
13 17parallel
Strand 4
A
91 94parallel
Strand 5
A
141 146parallel
Strand 6
A
184 191parallel
Strand 7
A
255 259parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
62 66first strand
Strand 2
B
37 42parallel
Strand 3
B
13 17parallel
Strand 4
B
91 94parallel
Strand 5
B
141 146parallel
Strand 6
B
184 191parallel
Strand 7
B
255 259parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
62 66first strand
Strand 2
C
37 42parallel
Strand 3
C
13 17parallel
Strand 4
C
91 94parallel
Strand 5
C
141 146parallel
Strand 6
C
184 191parallel
Strand 7
C
255 259parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
61 66first strand
Strand 2
D
37 42parallel
Strand 3
D
13 17parallel
Strand 4
D
91 94parallel
Strand 5
D
141 146parallel
Strand 6
D
184 191parallel
Strand 7
D
255 259parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il