Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZZU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ZZU entry

There are 4 chains in PDB entry 6ZZU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	VAL 163	GLY 497
A	VAL 163	GLY 497
C	VAL 163	GLY 497
D	VAL 163	GLY 497

There are 56 helices in PDB entry 6ZZU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	170	173	Right-handed 310
Helix 2	AA2	B	174	182	Right-handed alpha
Helix 3	AA3	B	196	208	Right-handed alpha
Helix 4	AA4	B	225	242	Right-handed alpha
Helix 5	AA5	B	248	261	Right-handed alpha
Helix 6	AA6	B	271	283	Right-handed alpha
Helix 7	AA7	B	295	305	Right-handed alpha
Helix 8	AA8	B	327	335	Right-handed alpha
Helix 9	AA9	B	335	340	Right-handed alpha
Helix 10	AB1	B	341	355	Right-handed alpha
Helix 11	AB2	B	359	374	Right-handed alpha
Helix 12	AB3	B	395	402	Right-handed alpha
Helix 13	AB4	B	436	451	Right-handed alpha
Helix 14	AB5	B	471	496	Right-handed alpha
Helix 15	AB6	A	171	176	Right-handed alpha
Helix 16	AB7	A	196	209	Right-handed alpha
Helix 17	AB8	A	225	240	Right-handed alpha
Helix 18	AB9	A	241	244	Right-handed 310
Helix 19	AC1	A	248	261	Right-handed alpha
Helix 20	AC2	A	271	283	Right-handed alpha
Helix 21	AC3	A	295	304	Right-handed alpha
Helix 22	AC4	A	327	335	Right-handed alpha
Helix 23	AC5	A	335	340	Right-handed alpha
Helix 24	AC6	A	341	354	Right-handed alpha
Helix 25	AC7	A	359	374	Right-handed alpha
Helix 26	AC8	A	391	395	Right-handed 310
Helix 27	AC9	A	397	403	Right-handed alpha
Helix 28	AD1	A	436	450	Right-handed alpha
Helix 29	AD2	A	471	496	Right-handed alpha
Helix 30	AD3	C	171	176	Right-handed alpha
Helix 31	AD4	C	196	208	Right-handed alpha
Helix 32	AD5	C	225	242	Right-handed alpha
Helix 33	AD6	C	248	261	Right-handed alpha
Helix 34	AD7	C	271	283	Right-handed alpha
Helix 35	AD8	C	295	304	Right-handed alpha
Helix 36	AD9	C	327	332	Right-handed alpha
Helix 37	AE1	C	335	340	Right-handed alpha
Helix 38	AE2	C	341	354	Right-handed alpha
Helix 39	AE3	C	359	374	Right-handed alpha
Helix 40	AE4	C	395	403	Right-handed alpha
Helix 41	AE5	C	436	448	Right-handed alpha
Helix 42	AE6	C	471	496	Right-handed alpha
Helix 43	AE7	D	171	176	Right-handed alpha
Helix 44	AE8	D	196	209	Right-handed alpha
Helix 45	AE9	D	225	242	Right-handed alpha
Helix 46	AF1	D	248	261	Right-handed alpha
Helix 47	AF2	D	271	283	Right-handed alpha
Helix 48	AF3	D	295	304	Right-handed alpha
Helix 49	AF4	D	327	332	Right-handed alpha
Helix 50	AF5	D	335	340	Right-handed alpha
Helix 51	AF6	D	341	354	Right-handed alpha
Helix 52	AF7	D	359	374	Right-handed alpha
Helix 53	AF8	D	391	395	Right-handed 310
Helix 54	AF9	D	397	403	Right-handed alpha
Helix 55	AG1	D	436	451	Right-handed alpha
Helix 56	AG2	D	471	496	Right-handed alpha

There are 14 sheets in PDB entry 6ZZU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	286	289	first strand
Strand 2	B	307	310	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	384	387	first strand
Strand 2	B	378	381	anti-parallel
Strand 3	B	430	434	parallel
Strand 4	B	408	411	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	456	460	first strand
Strand 2	B	465	469	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	286	289	first strand
Strand 2	A	307	310	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	378	380	first strand
Strand 2	A	385	387	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	408	411	first strand
Strand 2	A	430	433	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	456	460	first strand
Strand 2	A	465	469	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	286	289	first strand
Strand 2	C	307	310	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	384	387	first strand
Strand 2	C	378	381	anti-parallel
Strand 3	C	430	434	parallel
Strand 4	C	408	411	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	456	460	first strand
Strand 2	C	465	469	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	286	289	first strand
Strand 2	D	307	310	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	378	381	first strand
Strand 2	D	384	387	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	408	411	first strand
Strand 2	D	430	433	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	456	460	first strand
Strand 2	D	465	469	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ZZU

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ZZU