Analysis of interatomic Contacts of Structural Units in PDB entry:
7A06


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7A06 entry

There is 1 chain in PDB entry 7A06 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 80VAL 457
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 7A06. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
84 99Right-handed alpha
Helix 2
AA2
A
100 106Right-handed 310
Helix 3
AA3
A
107 111Right-handed 310
Helix 4
AA4
A
176 190Right-handed alpha
Helix 5
AA5
A
215 220Right-handed 310
Helix 6
AA6
A
221 237Right-handed alpha
Helix 7
AA7
A
247 263Right-handed alpha
Helix 8
AA8
A
267 279Right-handed alpha
Helix 9
AA9
A
281 295Right-handed alpha
Helix 10
AB1
A
308 310Right-handed 310
Helix 11
AB2
A
339 350Right-handed alpha
Helix 12
AB3
A
366 369Right-handed 310
Helix 13
AB4
A
371 387Right-handed alpha
Helix 14
AB5
A
388 393Right-handed 310
Helix 15
AB6
A
394 431Right-handed alpha
Helix 16
AB7
A
436 456Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 7A06. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 117first strand
Strand 2
A
121 128anti-parallel
Strand 3
A
142 149anti-parallel
Strand 4
A
203 207anti-parallel
Strand 5
A
196 200anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 213first strand
Strand 2
A
312 315anti-parallel
Strand 3
A
326 328anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 303first strand
Strand 2
A
335 338anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 353first strand
Strand 2
A
363 364anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il