Analysis of interatomic Contacts of Structural Units in PDB entry:
7A0C

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7A0C entry

There are 2 chains in PDB entry 7A0C (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	PRO 499
B	PRO 3	VAL 500

There are 38 helices in PDB entry 7A0C. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	26	34	Right-handed alpha
Helix 2	AA2	A	80	93	Right-handed alpha
Helix 3	AA3	A	94	99	Right-handed 310
Helix 4	AA4	A	101	106	Right-handed alpha
Helix 5	AA5	A	128	134	Right-handed alpha
Helix 6	AA6	A	143	145	Right-handed 310
Helix 7	AA7	A	201	211	Right-handed alpha
Helix 8	AA8	A	225	235	Right-handed alpha
Helix 9	AA9	A	262	273	Right-handed alpha
Helix 10	AB1	A	274	283	Right-handed alpha
Helix 11	AB2	A	311	322	Right-handed alpha
Helix 12	AB3	A	350	366	Right-handed alpha
Helix 13	AB4	A	377	388	Right-handed alpha
Helix 14	AB5	A	404	411	Right-handed alpha
Helix 15	AB6	A	416	423	Right-handed alpha
Helix 16	AB7	A	427	441	Right-handed alpha
Helix 17	AB8	A	443	461	Right-handed alpha
Helix 18	AB9	A	478	481	Right-handed 310
Helix 19	AC1	A	493	497	Right-handed 310
Helix 20	AC2	B	26	34	Right-handed alpha
Helix 21	AC3	B	80	93	Right-handed alpha
Helix 22	AC4	B	94	99	Right-handed 310
Helix 23	AC5	B	101	106	Right-handed alpha
Helix 24	AC6	B	128	134	Right-handed alpha
Helix 25	AC7	B	143	145	Right-handed 310
Helix 26	AC8	B	201	211	Right-handed alpha
Helix 27	AC9	B	225	234	Right-handed alpha
Helix 28	AD1	B	262	273	Right-handed alpha
Helix 29	AD2	B	274	283	Right-handed alpha
Helix 30	AD3	B	311	322	Right-handed alpha
Helix 31	AD4	B	350	366	Right-handed alpha
Helix 32	AD5	B	377	388	Right-handed alpha
Helix 33	AD6	B	404	411	Right-handed alpha
Helix 34	AD7	B	416	422	Right-handed alpha
Helix 35	AD8	B	427	441	Right-handed alpha
Helix 36	AD9	B	443	461	Right-handed alpha
Helix 37	AE1	B	478	481	Right-handed 310
Helix 38	AE2	B	493	497	Right-handed 310

There are 14 sheets in PDB entry 7A0C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	10	first strand
Strand 2	A	193	198	parallel
Strand 3	A	175	180	anti-parallel
Strand 4	A	165	171	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	40	first strand
Strand 2	A	46	48	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	56	first strand
Strand 2	A	62	67	anti-parallel
Strand 3	A	117	122	anti-parallel
Strand 4	A	107	112	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	148	first strand
Strand 2	A	151	156	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	216	219	first strand
Strand 2	A	464	476	anti-parallel
Strand 3	A	288	289	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	216	219	first strand
Strand 2	A	464	476	anti-parallel
Strand 3	A	239	253	anti-parallel
Strand 4	A	392	396	anti-parallel
Strand 5	A	341	347	parallel
Strand 6	A	370	376	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	334	335	first strand
Strand 2	A	338	339	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	10	first strand
Strand 2	B	193	198	parallel
Strand 3	B	175	180	anti-parallel
Strand 4	B	165	171	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	40	first strand
Strand 2	B	46	48	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	56	first strand
Strand 2	B	62	67	anti-parallel
Strand 3	B	117	122	anti-parallel
Strand 4	B	107	112	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	147	148	first strand
Strand 2	B	151	156	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	216	219	first strand
Strand 2	B	473	476	anti-parallel
Strand 3	B	239	242	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	288	289	first strand
Strand 2	B	464	470	anti-parallel
Strand 3	B	247	253	anti-parallel
Strand 4	B	392	396	anti-parallel
Strand 5	B	341	347	parallel
Strand 6	B	370	376	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	334	335	first strand
Strand 2	B	338	339	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7A0C

Analysis of interatomic Contacts of Structural Units in PDB entry:
7A0C