Analysis of interatomic Contacts of Structural Units in PDB entry:
7A0H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7A0H entry

There are 2 chains in PDB entry 7A0H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2LEU 286
B
 LEU 4HIS 289
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7A0H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 19Right-handed alpha
Helix 2
AA2
A
20 22Right-handed 310
Helix 3
AA3
A
23 36Right-handed alpha
Helix 4
AA4
A
38 56Right-handed alpha
Helix 5
AA5
A
71 73Right-handed 310
Helix 6
AA6
A
111 132Right-handed alpha
Helix 7
AA7
A
134 138Right-handed 310
Helix 8
AA8
A
242 267Right-handed alpha
Helix 9
AA9
A
275 279Right-handed 310
Helix 10
AB1
B
6 19Right-handed alpha
Helix 11
AB2
B
20 22Right-handed 310
Helix 12
AB3
B
23 35Right-handed alpha
Helix 13
AB4
B
38 56Right-handed alpha
Helix 14
AB5
B
110 132Right-handed alpha
Helix 15
AB6
B
242 282Right-handed alpha
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There are 7 sheets in PDB entry 7A0H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 62first strand
Strand 2
A
66 70anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
79 82anti-parallel
Strand 3
A
87 92anti-parallel
Strand 4
A
97 103anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 167first strand
Strand 2
A
170 183anti-parallel
Strand 3
A
187 200anti-parallel
Strand 4
A
206 220anti-parallel
Strand 5
A
223 238anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 270first strand
Strand 2
A
283 285anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 62first strand
Strand 2
B
66 70anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 76first strand
Strand 2
B
79 82anti-parallel
Strand 3
B
87 92anti-parallel
Strand 4
B
97 102anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
157 164first strand
Strand 2
B
173 184anti-parallel
Strand 3
B
187 198anti-parallel
Strand 4
B
206 218anti-parallel
Strand 5
B
226 238anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il