Analysis of interatomic Contacts of Structural Units in PDB entry:
7A0X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7A0X entry

There are 5 chains in PDB entry 7A0X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 11	LEU 380
B	ASP 11	ARG 383
C	ALA 1	VAL 220
D	ALA 1	ARG 207
E	ALA 1	PRO 176

There are 53 helices in PDB entry 7A0X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	29	Right-handed alpha
Helix 2	AA2	A	36	43	Right-handed alpha
Helix 3	AA3	A	59	86	Right-handed alpha
Helix 4	AA4	A	94	117	Right-handed alpha
Helix 5	AA5	A	122	126	Right-handed 310
Helix 6	AA6	A	127	131	Right-handed 310
Helix 7	AA7	A	133	145	Right-handed alpha
Helix 8	AA8	A	149	174	Right-handed alpha
Helix 9	AA9	A	180	200	Right-handed alpha
Helix 10	AB1	A	204	219	Right-handed alpha
Helix 11	AB2	A	222	237	Right-handed alpha
Helix 12	AB3	A	246	262	Right-handed alpha
Helix 13	AB4	A	262	272	Right-handed alpha
Helix 14	AB5	A	280	285	Right-handed alpha
Helix 15	AB6	A	286	298	Right-handed alpha
Helix 16	AB7	A	298	314	Right-handed alpha
Helix 17	AB8	A	326	335	Right-handed alpha
Helix 18	AB9	A	338	350	Right-handed alpha
Helix 19	AC1	A	355	378	Right-handed alpha
Helix 20	AC2	B	12	29	Right-handed alpha
Helix 21	AC3	B	31	43	Right-handed alpha
Helix 22	AC4	B	59	86	Right-handed alpha
Helix 23	AC5	B	94	117	Right-handed alpha
Helix 24	AC6	B	121	131	Right-handed 310
Helix 25	AC7	B	133	145	Right-handed alpha
Helix 26	AC8	B	149	174	Right-handed alpha
Helix 27	AC9	B	180	200	Right-handed alpha
Helix 28	AD1	B	204	219	Right-handed alpha
Helix 29	AD2	B	222	237	Right-handed alpha
Helix 30	AD3	B	241	245	Right-handed 310
Helix 31	AD4	B	246	262	Right-handed alpha
Helix 32	AD5	B	262	272	Right-handed alpha
Helix 33	AD6	B	280	285	Right-handed alpha
Helix 34	AD7	B	286	298	Right-handed alpha
Helix 35	AD8	B	298	314	Right-handed alpha
Helix 36	AD9	B	327	336	Right-handed alpha
Helix 37	AE1	B	338	350	Right-handed alpha
Helix 38	AE2	B	355	381	Right-handed alpha
Helix 39	AE3	C	28	32	Right-handed 310
Helix 40	AE4	C	87	91	Right-handed 310
Helix 41	AE5	C	105	107	Right-handed 310
Helix 42	AE6	C	165	167	Right-handed 310
Helix 43	AE7	D	74	78	Right-handed 310
Helix 44	AE8	D	117	124	Right-handed alpha
Helix 45	AE9	D	179	183	Right-handed alpha
Helix 46	AF1	E	28	32	Right-handed 310
Helix 47	AF2	E	87	91	Right-handed 310
Helix 48	AF3	E	105	107	Right-handed 310
Helix 49	AF4	E	165	167	Right-handed 310
Helix 50	AF5	E	196	198	Right-handed 310
Helix 51	AF6	F	74	78	Right-handed 310
Helix 52	AF7	F	117	123	Right-handed alpha
Helix 53	AF8	F	179	183	Right-handed alpha

There are 23 sheets in PDB entry 7A0X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	58	first strand
Strand 2	A	45	50	anti-parallel
Strand 3	B	45	50	anti-parallel
Strand 4	B	53	58	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	7	first strand
Strand 2	C	18	25	anti-parallel
Strand 3	C	78	83	anti-parallel
Strand 4	C	68	73	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	12	first strand
Strand 2	C	116	120	parallel
Strand 3	C	92	99	anti-parallel
Strand 4	C	34	39	anti-parallel
Strand 5	C	45	51	anti-parallel
Strand 6	C	58	60	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	12	first strand
Strand 2	C	116	120	parallel
Strand 3	C	92	99	anti-parallel
Strand 4	C	109	112	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	129	133	first strand
Strand 2	C	147	152	anti-parallel
Strand 3	C	188	191	anti-parallel
Strand 4	C	172	174	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	159	163	first strand
Strand 2	C	204	209	anti-parallel
Strand 3	C	214	219	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	178	179	first strand
Strand 2	C	185	186	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	7	10	first strand
Strand 2	D	98	102	parallel
Strand 3	D	79	86	anti-parallel
Strand 4	D	28	32	anti-parallel
Strand 5	D	40	43	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	7	10	first strand
Strand 2	D	98	102	parallel
Strand 3	D	79	86	anti-parallel
Strand 4	D	92	94	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	15	21	first strand
Strand 2	D	65	71	anti-parallel
Strand 3	D	57	62	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	110	114	first strand
Strand 2	D	125	135	anti-parallel
Strand 3	D	169	178	anti-parallel
Strand 4	D	155	159	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	141	146	first strand
Strand 2	D	188	193	anti-parallel
Strand 3	D	201	205	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	8	first strand
Strand 2	E	18	25	anti-parallel
Strand 3	E	78	83	anti-parallel
Strand 4	E	68	73	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	12	first strand
Strand 2	E	116	120	parallel
Strand 3	E	92	99	anti-parallel
Strand 4	E	34	39	anti-parallel
Strand 5	E	45	51	anti-parallel
Strand 6	E	58	60	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	12	first strand
Strand 2	E	116	120	parallel
Strand 3	E	92	99	anti-parallel
Strand 4	E	109	112	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	129	133	first strand
Strand 2	E	144	154	anti-parallel
Strand 3	E	185	194	anti-parallel
Strand 4	E	172	174	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	129	133	first strand
Strand 2	E	144	154	anti-parallel
Strand 3	E	185	194	anti-parallel
Strand 4	E	178	179	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	159	163	first strand
Strand 2	E	203	209	anti-parallel
Strand 3	E	214	220	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	7	10	first strand
Strand 2	F	98	102	parallel
Strand 3	F	80	86	anti-parallel
Strand 4	F	28	32	anti-parallel
Strand 5	F	40	43	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	7	10	first strand
Strand 2	F	98	102	parallel
Strand 3	F	80	86	anti-parallel
Strand 4	F	92	94	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	16	21	first strand
Strand 2	F	65	70	anti-parallel
Strand 3	F	57	62	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	110	114	first strand
Strand 2	F	125	135	anti-parallel
Strand 3	F	169	178	anti-parallel
Strand 4	F	155	159	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	149	150	first strand
Strand 2	F	141	146	anti-parallel
Strand 3	F	187	193	anti-parallel
Strand 4	F	201	206	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7A0X

Analysis of interatomic Contacts of Structural Units in PDB entry:
7A0X