Analysis of interatomic Contacts of Structural Units in PDB entry:
7A5T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7A5T entry

There is 1 chain in PDB entry 7A5T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 27ALA 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7A5T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 41Right-handed alpha
Helix 2
AA2
A
69 71Right-handed 310
Helix 3
AA3
A
72 86Right-handed alpha
Helix 4
AA4
A
87 92Right-handed 310
Helix 5
AA5
A
98 102Right-handed 310
Helix 6
AA6
A
108 112Right-handed 310
Helix 7
AA7
A
119 129Right-handed alpha
Helix 8
AA8
A
131 143Right-handed alpha
Helix 9
AA9
A
144 145Right-handed 310
Helix 10
AB1
A
145 155Right-handed alpha
Helix 11
AB2
A
167 171Right-handed 310
Helix 12
AB3
A
182 195Right-handed alpha
Helix 13
AB4
A
200 213Right-handed alpha
Helix 14
AB5
A
220 225Right-handed alpha
Helix 15
AB6
A
267 271Right-handed 310
Helix 16
AB7
A
277 293Right-handed alpha
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There are 3 sheets in PDB entry 7A5T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 60first strand
Strand 2
A
43 48anti-parallel
Strand 3
A
258 266anti-parallel
Strand 4
A
243 251anti-parallel
Strand 5
A
230 238anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 67first strand
Strand 2
A
180 181anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 95first strand
Strand 2
A
117 118anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il