Analysis of interatomic Contacts of Structural Units in PDB entry:
7A79


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7A79 entry

There are 4 chains in PDB entry 7A79 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 231PRO 459
B
 SER 231PRO 459
C
 LYS 471SER 483
D
 LYS 471SER 483
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 7A79. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
235 246Right-handed alpha
Helix 2
AA2
A
264 287Right-handed alpha
Helix 3
AA3
A
289 293Right-handed 310
Helix 4
AA4
A
294 318Right-handed alpha
Helix 5
AA5
A
319 321Right-handed 310
Helix 6
AA6
A
335 341Right-handed alpha
Helix 7
AA7
A
343 354Right-handed alpha
Helix 8
AA8
A
354 362Right-handed alpha
Helix 9
AA9
A
364 377Right-handed alpha
Helix 10
AB1
A
386 409Right-handed alpha
Helix 11
AB2
A
414 421Right-handed alpha
Helix 12
AB3
A
422 444Right-handed alpha
Helix 13
AB4
A
449 457Right-handed alpha
Helix 14
AB5
B
235 246Right-handed alpha
Helix 15
AB6
B
264 287Right-handed alpha
Helix 16
AB7
B
289 293Right-handed 310
Helix 17
AB8
B
294 318Right-handed alpha
Helix 18
AB9
B
335 341Right-handed alpha
Helix 19
AC1
B
343 354Right-handed alpha
Helix 20
AC2
B
354 362Right-handed alpha
Helix 21
AC3
B
364 377Right-handed alpha
Helix 22
AC4
B
386 409Right-handed alpha
Helix 23
AC5
B
414 421Right-handed alpha
Helix 24
AC6
B
422 444Right-handed alpha
Helix 25
AC7
B
449 457Right-handed alpha
Helix 26
AC8
C
472 481Right-handed alpha
Helix 27
AC9
D
472 481Right-handed alpha
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There are 2 sheets in PDB entry 7A79. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 326first strand
Strand 2
A
332 334anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
324 326first strand
Strand 2
B
332 334anti-parallel
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