Analysis of interatomic Contacts of Structural Units in PDB entry:
7A7A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7A7A entry

There are 2 chains in PDB entry 7A7A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 37VAL 739
B
 PRO 40VAL 739
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 69 helices in PDB entry 7A7A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 48Right-handed 310
Helix 2
AA2
A
63 69Right-handed alpha
Helix 3
AA3
A
72 86Right-handed alpha
Helix 4
AA4
A
93 97Right-handed 310
Helix 5
AA5
A
98 111Right-handed alpha
Helix 6
AA6
A
129 134Right-handed alpha
Helix 7
AA7
A
141 146Right-handed alpha
Helix 8
AA8
A
148 156Right-handed alpha
Helix 9
AA9
A
157 159Right-handed 310
Helix 10
AB1
A
160 175Right-handed alpha
Helix 11
AB2
A
244 254Right-handed alpha
Helix 12
AB3
A
258 270Right-handed alpha
Helix 13
AB4
A
331 337Right-handed alpha
Helix 14
AB5
A
377 381Right-handed 310
Helix 15
AB6
A
382 387Right-handed alpha
Helix 16
AB7
A
387 397Right-handed alpha
Helix 17
AB8
A
400 418Right-handed alpha
Helix 18
AB9
A
419 421Right-handed 310
Helix 19
AC1
A
422 426Right-handed 310
Helix 20
AC2
A
436 440Right-handed 310
Helix 21
AC3
A
453 464Right-handed alpha
Helix 22
AC4
A
468 481Right-handed alpha
Helix 23
AC5
A
495 498Right-handed 310
Helix 24
AC6
A
499 504Right-handed alpha
Helix 25
AC7
A
513 531Right-handed alpha
Helix 26
AC8
A
539 558Right-handed alpha
Helix 27
AC9
A
580 588Right-handed 310
Helix 28
AD1
A
605 617Right-handed alpha
Helix 29
AD2
A
620 634Right-handed alpha
Helix 30
AD3
A
637 641Right-handed 310
Helix 31
AD4
A
655 662Right-handed alpha
Helix 32
AD5
A
701 712Right-handed alpha
Helix 33
AD6
A
716 733Right-handed alpha
Helix 34
AD7
B
44 48Right-handed 310
Helix 35
AD8
B
63 69Right-handed alpha
Helix 36
AD9
B
72 85Right-handed alpha
Helix 37
AE1
B
93 97Right-handed 310
Helix 38
AE2
B
98 111Right-handed alpha
Helix 39
AE3
B
130 134Right-handed 310
Helix 40
AE4
B
135 139Right-handed 310
Helix 41
AE5
B
141 148Right-handed alpha
Helix 42
AE6
B
148 156Right-handed alpha
Helix 43
AE7
B
157 159Right-handed 310
Helix 44
AE8
B
160 176Right-handed alpha
Helix 45
AE9
B
240 254Right-handed alpha
Helix 46
AF1
B
258 270Right-handed alpha
Helix 47
AF2
B
287 291Right-handed 310
Helix 48
AF3
B
292 296Right-handed 310
Helix 49
AF4
B
331 337Right-handed alpha
Helix 50
AF5
B
357 359Right-handed 310
Helix 51
AF6
B
382 387Right-handed alpha
Helix 52
AF7
B
387 399Right-handed alpha
Helix 53
AF8
B
400 417Right-handed alpha
Helix 54
AF9
B
422 426Right-handed 310
Helix 55
AG1
B
436 440Right-handed 310
Helix 56
AG2
B
451 464Right-handed alpha
Helix 57
AG3
B
468 481Right-handed alpha
Helix 58
AG4
B
495 498Right-handed 310
Helix 59
AG5
B
499 504Right-handed alpha
Helix 60
AG6
B
514 531Right-handed alpha
Helix 61
AG7
B
539 557Right-handed alpha
Helix 62
AG8
B
582 586Right-handed 310
Helix 63
AG9
B
605 617Right-handed alpha
Helix 64
AH1
B
620 634Right-handed alpha
Helix 65
AH2
B
637 641Right-handed 310
Helix 66
AH3
B
655 662Right-handed alpha
Helix 67
AH4
B
693 701Right-handed alpha
Helix 68
AH5
B
701 712Right-handed alpha
Helix 69
AH6
B
717 733Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7A7A. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
341 345first strand
Strand 2
B
351 355anti-parallel
Strand 3
B
376 377anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
667 670first strand
Strand 2
B
677 681anti-parallel
Strand 3
B
687 692anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il