Analysis of interatomic Contacts of Structural Units in PDB entry:
7A8P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7A8P entry

There is 1 chain in PDB entry 7A8P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 221SER 1230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 7A8P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
221 237Right-handed alpha
Helix 2
AA2
A
238 252Right-handed alpha
Helix 3
AA3
A
252 257Right-handed alpha
Helix 4
AA4
A
260 275Right-handed alpha
Helix 5
AA5
A
276 290Right-handed alpha
Helix 6
AA6
A
295 310Right-handed alpha
Helix 7
AA7
A
312 326Right-handed alpha
Helix 8
AA8
A
329 337Right-handed alpha
Helix 9
AA9
A
340 353Right-handed alpha
Helix 10
AB1
A
374 379Right-handed alpha
Helix 11
AB2
A
392 410Right-handed alpha
Helix 12
AB3
A
426 463Right-handed alpha
Helix 13
AB4
A
467 474Right-handed alpha
Helix 14
AB5
A
475 490Right-handed alpha
Helix 15
AB6
A
497 520Right-handed alpha
Helix 16
AB7
A
521 538Right-handed alpha
Helix 17
AB8
A
548 557Right-handed alpha
Helix 18
AB9
A
568 587Right-handed alpha
Helix 19
AC1
A
624 635Right-handed alpha
Helix 20
AC2
A
676 687Right-handed alpha
Helix 21
AC3
A
688 704Right-handed alpha
Helix 22
AC4
A
710 723Right-handed alpha
Helix 23
AC5
A
772 789Right-handed alpha
Helix 24
AC6
A
810 814Right-handed 310
Helix 25
AC7
A
818 824Right-handed alpha
Helix 26
AC8
A
836 850Right-handed alpha
Helix 27
AC9
A
856 867Right-handed alpha
Helix 28
AD1
A
867 877Right-handed alpha
Helix 29
AD2
A
884 888Right-handed 310
Helix 30
AD3
A
890 907Right-handed alpha
Helix 31
AD4
A
925 936Right-handed alpha
Helix 32
AD5
A
937 944Right-handed alpha
Helix 33
AD6
A
954 974Right-handed alpha
Helix 34
AD7
A
975 981Right-handed alpha
Helix 35
AD8
A
986 1000Right-handed alpha
Helix 36
AD9
A
1006 1017Right-handed alpha
Helix 37
AE1
A
1021 1023Right-handed 310
Helix 38
AE2
A
1024 1044Right-handed alpha
Helix 39
AE3
A
1044 1064Right-handed alpha
Helix 40
AE4
A
1114 1142Right-handed alpha
Helix 41
AE5
A
1159 1177Right-handed alpha
Helix 42
AE6
A
1178 1192Right-handed alpha
Helix 43
AE7
A
1204 1210Right-handed alpha
Helix 44
AE8
A
1220 1225Right-handed alpha
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There are 8 sheets in PDB entry 7A8P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 415first strand
Strand 2
A
638 642anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
495 496first strand
Strand 2
A
620 622anti-parallel
Strand 3
A
607 608anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
588 589first strand
Strand 2
A
603 604anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
794 795first strand
Strand 2
A
706 709anti-parallel
Strand 3
A
825 827anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
798 799first strand
Strand 2
A
807 808anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
831 832first strand
Strand 2
A
914 915anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
919 921first strand
Strand 2
A
1152 1155anti-parallel
Strand 3
A
1147 1149anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1069 1071first strand
Strand 2
A
1077 1079anti-parallel
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