Analysis of interatomic Contacts of Structural Units in PDB entry:
7A8U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7A8U entry

There are 2 chains in PDB entry 7A8U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 273ASP 746
B
 TYR 218TYR 228
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7A8U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
275 305Right-handed alpha
Helix 2
AA2
A
312 330Right-handed alpha
Helix 3
AA3
A
330 355Right-handed alpha
Helix 4
AA4
A
367 382Right-handed alpha
Helix 5
AA5
A
384 413Right-handed alpha
Helix 6
AA6
A
419 426Right-handed alpha
Helix 7
AA7
A
427 432Right-handed 310
Helix 8
AA8
A
433 453Right-handed alpha
Helix 9
AA9
A
454 471Right-handed alpha
Helix 10
AB1
A
475 539Right-handed alpha
Helix 11
AB2
A
547 564Right-handed alpha
Helix 12
AB3
A
564 590Right-handed alpha
Helix 13
AB4
A
603 664Right-handed alpha
Helix 14
AB5
A
670 687Right-handed alpha
Helix 15
AB6
A
688 705Right-handed alpha
Helix 16
AB7
A
716 744Right-handed alpha
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There are no sheets in PDB entry 7A8U
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il