Analysis of interatomic Contacts of Structural Units in PDB entry:
7ABB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ABB entry

There is 1 chain in PDB entry 7ABB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 22TRP 400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7ABB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 42Right-handed alpha
Helix 2
AA2
A
60 69Right-handed alpha
Helix 3
AA3
A
97 108Right-handed alpha
Helix 4
AA4
A
109 111Right-handed 310
Helix 5
AA5
A
112 119Right-handed alpha
Helix 6
AA6
A
119 133Right-handed alpha
Helix 7
AA7
A
134 137Right-handed 310
Helix 8
AA8
A
142 146Right-handed alpha
Helix 9
AA9
A
146 160Right-handed alpha
Helix 10
AB1
A
162 164Right-handed 310
Helix 11
AB2
A
165 178Right-handed alpha
Helix 12
AB3
A
193 212Right-handed alpha
Helix 13
AB4
A
217 223Right-handed alpha
Helix 14
AB5
A
233 248Right-handed alpha
Helix 15
AB6
A
249 266Right-handed alpha
Helix 16
AB7
A
266 276Right-handed alpha
Helix 17
AB8
A
279 291Right-handed alpha
Helix 18
AB9
A
304 308Right-handed 310
Helix 19
AC1
A
318 323Right-handed alpha
Helix 20
AC2
A
356 375Right-handed alpha
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There are 3 sheets in PDB entry 7ABB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 49first strand
Strand 2
A
55 58anti-parallel
Strand 3
A
314 316parallel
Strand 4
A
297 300anti-parallel
Strand 5
A
74 75anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 141first strand
Strand 2
A
397 399anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 227first strand
Strand 2
A
230 231anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il