Analysis of interatomic Contacts of Structural Units in PDB entry:
7ABH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ABH entry

There are 16 chains in PDB entry 7ABH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
L
GLY 8ASP 55
y
ALA 2GLU 101
Z
A 141 U 168
F
SER 19ALA 93
4
ILE 392GLY 499
u
GLU 118LEU 1304
T
ASN 458THR 689
E
MET 1PHE 1217
w
ASP 12ALA 89
x
MET 1PRO 79
z
ARG 12ILE 119
0
LYS 221LEU 370
1
ASN 2GLU 123
Y
GLU 32LEU 126
2
A 29 U 65
7
GLU 147ARG 179
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are120 helices in PDB entry 7ABH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
L
12 26Right-handed alpha
Helix 2
AA2
L
30 36Right-handed alpha
Helix 3
AA3
L
42 53Right-handed alpha
Helix 4
AA4
y
51 55Right-handed 310
Helix 5
AA5
y
73 78Right-handed alpha
Helix 6
AA6
F
20 42Right-handed alpha
Helix 7
AA7
F
65 71Right-handed alpha
Helix 8
AA8
F
78 90Right-handed alpha
Helix 9
AA9
4
393 400Right-handed alpha
Helix 10
AB1
4
418 427Right-handed alpha
Helix 11
AB2
4
428 439Right-handed alpha
Helix 12
AB3
4
451 462Right-handed alpha
Helix 13
AB4
4
488 498Right-handed alpha
Helix 14
AB5
u
119 126Right-handed 310
Helix 15
AB6
u
312 326Right-handed alpha
Helix 16
AB7
u
326 335Right-handed alpha
Helix 17
AB8
u
400 408Right-handed alpha
Helix 18
AB9
u
421 426Right-handed alpha
Helix 19
AC1
u
427 432Right-handed alpha
Helix 20
AC2
u
468 473Right-handed alpha
Helix 21
AC3
u
475 480Right-handed alpha
Helix 22
AC4
u
491 498Right-handed alpha
Helix 23
AC5
u
499 506Right-handed alpha
Helix 24
AC6
u
508 522Right-handed alpha
Helix 25
AC7
u
522 527Right-handed alpha
Helix 26
AC8
u
527 540Right-handed alpha
Helix 27
AC9
u
545 563Right-handed alpha
Helix 28
AD1
u
570 583Right-handed alpha
Helix 29
AD2
u
586 604Right-handed alpha
Helix 30
AD3
u
605 614Right-handed alpha
Helix 31
AD4
u
621 640Right-handed alpha
Helix 32
AD5
u
640 653Right-handed alpha
Helix 33
AD6
u
657 676Right-handed alpha
Helix 34
AD7
u
677 681Right-handed 310
Helix 35
AD8
u
682 691Right-handed alpha
Helix 36
AD9
u
692 694Right-handed 310
Helix 37
AE1
u
698 716Right-handed alpha
Helix 38
AE2
u
724 726Right-handed 310
Helix 39
AE3
u
727 737Right-handed alpha
Helix 40
AE4
u
740 754Right-handed alpha
Helix 41
AE5
u
758 776Right-handed alpha
Helix 42
AE6
u
777 779Right-handed 310
Helix 43
AE7
u
781 797Right-handed alpha
Helix 44
AE8
u
802 810Right-handed alpha
Helix 45
AE9
u
810 817Right-handed alpha
Helix 46
AF1
u
822 825Right-handed 310
Helix 47
AF2
u
826 845Right-handed alpha
Helix 48
AF3
u
845 855Right-handed alpha
Helix 49
AF4
u
856 859Right-handed 310
Helix 50
AF5
u
861 879Right-handed alpha
Helix 51
AF6
u
880 884Right-handed 310
Helix 52
AF7
u
885 902Right-handed alpha
Helix 53
AF8
u
907 922Right-handed alpha
Helix 54
AF9
u
923 926Right-handed 310
Helix 55
AG1
u
927 942Right-handed alpha
Helix 56
AG2
u
947 965Right-handed alpha
Helix 57
AG3
u
967 982Right-handed alpha
Helix 58
AG4
u
986 1004Right-handed alpha
Helix 59
AG5
u
1012 1021Right-handed alpha
Helix 60
AG6
u
1022 1027Right-handed 310
Helix 61
AG7
u
1028 1046Right-handed alpha
Helix 62
AG8
u
1051 1063Right-handed alpha
Helix 63
AG9
u
1064 1068Right-handed 310
Helix 64
AH1
u
1071 1088Right-handed alpha
Helix 65
AH2
u
1089 1099Right-handed alpha
Helix 66
AH3
u
1110 1123Right-handed alpha
Helix 67
AH4
u
1124 1136Right-handed alpha
Helix 68
AH5
u
1140 1159Right-handed alpha
Helix 69
AH6
u
1160 1164Right-handed 310
Helix 70
AH7
u
1165 1177Right-handed alpha
Helix 71
AH8
u
1181 1199Right-handed alpha
Helix 72
AH9
u
1204 1216Right-handed alpha
Helix 73
AI1
u
1217 1220Right-handed 310
Helix 74
AI2
u
1223 1241Right-handed alpha
Helix 75
AI3
u
1242 1251Right-handed alpha
Helix 76
AI4
u
1259 1275Right-handed alpha
Helix 77
AI5
u
1279 1284Right-handed alpha
Helix 78
AI6
u
1297 1302Right-handed 310
Helix 79
AI7
T
461 469Right-handed alpha
Helix 80
AI8
T
471 475Right-handed 310
Helix 81
AI9
T
476 480Right-handed 310
Helix 82
AJ1
T
484 493Right-handed alpha
Helix 83
AJ2
T
501 505Right-handed 310
Helix 84
AJ3
T
525 530Right-handed alpha
Helix 85
AJ4
T
532 545Right-handed alpha
Helix 86
AJ5
T
568 577Right-handed alpha
Helix 87
AJ6
T
610 618Right-handed alpha
Helix 88
AJ7
T
631 640Right-handed alpha
Helix 89
AJ8
E
191 195Right-handed 310
Helix 90
AJ9
E
429 433Right-handed 310
Helix 91
AK1
E
808 825Right-handed alpha
Helix 92
AK2
E
838 845Right-handed alpha
Helix 93
AK3
E
1134 1152Right-handed alpha
Helix 94
AK4
E
1159 1165Right-handed alpha
Helix 95
AK5
E
1175 1180Right-handed alpha
Helix 96
AK6
E
1180 1185Right-handed alpha
Helix 97
AK7
E
1186 1198Right-handed alpha
Helix 98
AK8
E
1200 1216Right-handed alpha
Helix 99
AK9
w
25 37Right-handed alpha
Helix 100
AL1
w
63 73Right-handed alpha
Helix 101
AL2
x
27 46Right-handed alpha
Helix 102
AL3
x
46 55Right-handed alpha
Helix 103
AL4
x
60 71Right-handed alpha
Helix 104
AL5
z
31 40Right-handed alpha
Helix 105
AL6
z
66 77Right-handed alpha
Helix 106
AL7
z
105 117Right-handed alpha
Helix 107
AL8
0
230 237Right-handed alpha
Helix 108
AL9
1
4 20Right-handed alpha
Helix 109
AM1
1
23 27Right-handed 310
Helix 110
AM2
1
48 57Right-handed alpha
Helix 111
AM3
1
58 60Right-handed 310
Helix 112
AM4
1
86 97Right-handed alpha
Helix 113
AM5
Y
32 36Right-handed 310
Helix 114
AM6
Y
39 43Right-handed 310
Helix 115
AM7
Y
48 60Right-handed alpha
Helix 116
AM8
Y
64 75Right-handed alpha
Helix 117
AM9
Y
81 93Right-handed alpha
Helix 118
AN1
Y
95 115Right-handed alpha
Helix 119
AN2
Y
121 126Right-handed alpha
Helix 120
AN3
7
148 179Right-handed alpha
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There are 34 sheets in PDB entry 7ABH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
y
15 19first strand
Strand 2
y
44 46anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
y
21 23first strand
Strand 2
y
65 68anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
y
39 42first strand
Strand 2
y
70 72anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
46 48first strand
Strand 2
F
54 56anti-parallel
Strand 3
F
61 63anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
4
406 408first strand
Strand 2
4
414 416anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
u
413 414first strand
Strand 2
z
45 50anti-parallel
Strand 3
z
60 64anti-parallel
Strand 4
z
20 24anti-parallel
Strand 5
z
88 91anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
1117 1119first strand
Strand 2
E
1126 1131anti-parallel
Strand 3
E
3 9anti-parallel
Strand 4
E
1173 1174parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
16 20first strand
Strand 2
E
29 33anti-parallel
Strand 3
E
37 41anti-parallel
Strand 4
E
52 57anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
62 68first strand
Strand 2
E
77 82anti-parallel
Strand 3
E
86 91anti-parallel
Strand 4
E
100 106anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
120 123first strand
Strand 2
E
129 133anti-parallel
Strand 3
E
139 145anti-parallel
Strand 4
E
153 154anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
120 123first strand
Strand 2
E
129 133anti-parallel
Strand 3
E
139 145anti-parallel
Strand 4
E
158 159anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
165 172first strand
Strand 2
E
181 188anti-parallel
Strand 3
E
207 214anti-parallel
Strand 4
E
219 227anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
232 238first strand
Strand 2
E
247 252anti-parallel
Strand 3
E
255 258anti-parallel
Strand 4
E
267 269anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
273 274first strand
Strand 2
E
386 387parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
289 294first strand
Strand 2
E
299 304anti-parallel
Strand 3
E
309 317anti-parallel
Strand 4
E
322 332anti-parallel
Strand 5
E
372 374anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
336 342first strand
Strand 2
E
346 351anti-parallel
Strand 3
E
357 361anti-parallel
Strand 4
E
395 399anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
407 413first strand
Strand 2
E
422 427anti-parallel
Strand 3
E
434 438anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
445 450first strand
Strand 2
E
761 766anti-parallel
Strand 3
E
753 758anti-parallel
Strand 4
E
741 745anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
458 462first strand
Strand 2
E
473 477anti-parallel
Strand 3
E
482 486anti-parallel
Strand 4
E
493 494anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
507 510first strand
Strand 2
E
516 520anti-parallel
Strand 3
E
523 527anti-parallel
Strand 4
E
533 537anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
544 549first strand
Strand 2
E
553 558anti-parallel
Strand 3
E
563 568anti-parallel
Strand 4
E
574 576anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
587 592first strand
Strand 2
E
604 609anti-parallel
Strand 3
E
613 618anti-parallel
Strand 4
E
626 632anti-parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
637 643first strand
Strand 2
E
664 669anti-parallel
Strand 3
E
674 678anti-parallel
Strand 4
E
687 689anti-parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
700 706first strand
Strand 2
E
709 715anti-parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
721 724first strand
Strand 2
E
729 732anti-parallel
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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
785 790first strand
Strand 2
E
797 804anti-parallel
Strand 3
E
862 869anti-parallel
Strand 4
E
876 881anti-parallel
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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
886 895first strand
Strand 2
E
903 911anti-parallel
Strand 3
E
922 928anti-parallel
Strand 4
E
942 945anti-parallel
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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
949 955first strand
Strand 2
E
958 963anti-parallel
Strand 3
E
966 971anti-parallel
Strand 4
E
978 983anti-parallel
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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
990 995first strand
Strand 2
E
999 1004anti-parallel
Strand 3
E
1009 1015anti-parallel
Strand 4
E
1020 1023anti-parallel
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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
1036 1038first strand
Strand 2
E
1043 1047anti-parallel
Strand 3
E
1052 1057anti-parallel
Strand 4
E
1090 1096anti-parallel
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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
w
41 43first strand
Strand 2
w
56 60anti-parallel
Strand 3
w
14 18anti-parallel
Strand 4
w
87 88anti-parallel
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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
w
78 79first strand
Strand 2
w
82 83anti-parallel
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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
0
307 314first strand
Strand 2
0
320 327anti-parallel
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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
1
62 67first strand
Strand 2
1
80 84anti-parallel
Strand 3
1
37 41anti-parallel
Strand 4
1
108 111anti-parallel
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