Analysis of interatomic Contacts of Structural Units in PDB entry:
7ABW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ABW entry

There are 2 chains in PDB entry 7ABW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 378
B
 MET 1ARG 382
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 7ABW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 30Right-handed alpha
Helix 2
AA2
A
32 41Right-handed alpha
Helix 3
AA3
A
42 46Right-handed 310
Helix 4
AA4
A
55 67Right-handed alpha
Helix 5
AA5
A
127 138Right-handed alpha
Helix 6
AA6
A
146 168Right-handed alpha
Helix 7
AA7
A
190 200Right-handed alpha
Helix 8
AA8
A
201 221Right-handed alpha
Helix 9
AA9
A
225 231Right-handed alpha
Helix 10
AB1
A
239 246Right-handed alpha
Helix 11
AB2
A
248 253Right-handed 310
Helix 12
AB3
A
258 274Right-handed alpha
Helix 13
AB4
A
326 334Right-handed alpha
Helix 14
AB5
A
334 340Right-handed alpha
Helix 15
AB6
A
341 343Right-handed 310
Helix 16
AB7
A
344 375Right-handed alpha
Helix 17
AB8
B
2 16Right-handed alpha
Helix 18
AB9
B
16 30Right-handed alpha
Helix 19
AC1
B
32 41Right-handed alpha
Helix 20
AC2
B
42 46Right-handed 310
Helix 21
AC3
B
55 67Right-handed alpha
Helix 22
AC4
B
128 139Right-handed alpha
Helix 23
AC5
B
146 168Right-handed alpha
Helix 24
AC6
B
190 200Right-handed alpha
Helix 25
AC7
B
202 221Right-handed alpha
Helix 26
AC8
B
225 231Right-handed alpha
Helix 27
AC9
B
239 246Right-handed alpha
Helix 28
AD1
B
248 253Right-handed 310
Helix 29
AD2
B
258 274Right-handed alpha
Helix 30
AD3
B
300 304Right-handed 310
Helix 31
AD4
B
328 333Right-handed alpha
Helix 32
AD5
B
334 341Right-handed alpha
Helix 33
AD6
B
344 378Right-handed alpha
Helix 34
AD7
B
379 381Right-handed 310
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There are 2 sheets in PDB entry 7ABW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 116first strand
Strand 2
A
102 105anti-parallel
Strand 3
A
85 91anti-parallel
Strand 4
A
70 76anti-parallel
Strand 5
A
279 285anti-parallel
Strand 6
A
290 295anti-parallel
Strand 7
A
305 310anti-parallel
Strand 8
A
316 320anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 116first strand
Strand 2
B
102 105anti-parallel
Strand 3
B
85 91anti-parallel
Strand 4
B
70 76anti-parallel
Strand 5
B
279 285anti-parallel
Strand 6
B
290 295anti-parallel
Strand 7
B
305 310anti-parallel
Strand 8
B
316 319anti-parallel
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