Analysis of interatomic Contacts of Structural Units in PDB entry:
7AE9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7AE9 entry

There are 8 chains in PDB entry 7AE9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3LEU 148
B
 ASN 3GLU 144
C
 THR 2GLU 145
D
 ASN 3GLU 144
E
 LYS 4VAL 150
F
 PRO 6VAL 150
G
 LYS 4VAL 150
H
 ILE 5VAL 150
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 74 helices in PDB entry 7AE9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 24Right-handed alpha
Helix 2
AA2
A
25 27Right-handed 310
Helix 3
AA3
A
30 36Right-handed alpha
Helix 4
AA4
A
37 67Right-handed alpha
Helix 5
AA5
A
73 84Right-handed alpha
Helix 6
AA6
A
88 96Right-handed alpha
Helix 7
AA7
A
97 102Right-handed 310
Helix 8
AA8
A
113 148Right-handed alpha
Helix 9
AA9
B
5 24Right-handed alpha
Helix 10
AB1
B
25 27Right-handed 310
Helix 11
AB2
B
30 36Right-handed alpha
Helix 12
AB3
B
37 67Right-handed alpha
Helix 13
AB4
B
73 84Right-handed alpha
Helix 14
AB5
B
88 96Right-handed alpha
Helix 15
AB6
B
97 102Right-handed 310
Helix 16
AB7
B
113 144Right-handed alpha
Helix 17
AB8
C
5 24Right-handed alpha
Helix 18
AB9
C
25 27Right-handed 310
Helix 19
AC1
C
30 36Right-handed alpha
Helix 20
AC2
C
37 67Right-handed alpha
Helix 21
AC3
C
73 84Right-handed alpha
Helix 22
AC4
C
88 96Right-handed alpha
Helix 23
AC5
C
97 107Right-handed alpha
Helix 24
AC6
C
113 144Right-handed alpha
Helix 25
AC7
D
5 24Right-handed alpha
Helix 26
AC8
D
25 27Right-handed 310
Helix 27
AC9
D
30 36Right-handed alpha
Helix 28
AD1
D
37 67Right-handed alpha
Helix 29
AD2
D
73 84Right-handed alpha
Helix 30
AD3
D
88 96Right-handed alpha
Helix 31
AD4
D
97 107Right-handed alpha
Helix 32
AD5
D
113 144Right-handed alpha
Helix 33
AD6
E
7 15Right-handed alpha
Helix 34
AD7
E
17 22Right-handed alpha
Helix 35
AD8
E
32 37Right-handed alpha
Helix 36
AD9
E
52 63Right-handed alpha
Helix 37
AE1
E
66 68Right-handed 310
Helix 38
AE2
E
69 79Right-handed alpha
Helix 39
AE3
E
81 83Right-handed 310
Helix 40
AE4
E
91 93Right-handed 310
Helix 41
AE5
E
94 105Right-handed alpha
Helix 42
AE6
E
115 124Right-handed alpha
Helix 43
AE7
E
126 149Right-handed alpha
Helix 44
AE8
F
7 15Right-handed alpha
Helix 45
AE9
F
17 22Right-handed alpha
Helix 46
AF1
F
32 37Right-handed alpha
Helix 47
AF2
F
52 60Right-handed alpha
Helix 48
AF3
F
66 68Right-handed 310
Helix 49
AF4
F
69 79Right-handed alpha
Helix 50
AF5
F
81 83Right-handed 310
Helix 51
AF6
F
91 93Right-handed 310
Helix 52
AF7
F
94 105Right-handed alpha
Helix 53
AF8
F
115 124Right-handed alpha
Helix 54
AF9
F
126 149Right-handed alpha
Helix 55
AG1
G
7 15Right-handed alpha
Helix 56
AG2
G
17 22Right-handed alpha
Helix 57
AG3
G
32 37Right-handed alpha
Helix 58
AG4
G
52 63Right-handed alpha
Helix 59
AG5
G
65 68Right-handed 310
Helix 60
AG6
G
69 79Right-handed alpha
Helix 61
AG7
G
81 83Right-handed 310
Helix 62
AG8
G
91 93Right-handed 310
Helix 63
AG9
G
94 105Right-handed alpha
Helix 64
AH1
G
114 124Right-handed alpha
Helix 65
AH2
G
126 149Right-handed alpha
Helix 66
AH3
H
7 15Right-handed alpha
Helix 67
AH4
H
17 22Right-handed alpha
Helix 68
AH5
H
52 60Right-handed alpha
Helix 69
AH6
H
69 79Right-handed alpha
Helix 70
AH7
H
81 83Right-handed 310
Helix 71
AH8
H
91 93Right-handed 310
Helix 72
AH9
H
94 105Right-handed alpha
Helix 73
AI1
H
115 124Right-handed alpha
Helix 74
AI2
H
126 149Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 7AE9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
85 89first strand
Strand 2
E
45 51parallel
Strand 3
E
25 31anti-parallel
Strand 4
E
106 110anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
85 89first strand
Strand 2
F
45 51parallel
Strand 3
F
25 31anti-parallel
Strand 4
F
106 110anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
85 89first strand
Strand 2
G
45 51parallel
Strand 3
G
25 31anti-parallel
Strand 4
G
106 110anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
85 89first strand
Strand 2
H
45 51parallel
Strand 3
H
25 31anti-parallel
Strand 4
H
106 110anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il