Analysis of interatomic Contacts of Structural Units in PDB entry:
7AEJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7AEJ entry

There are 4 chains in PDB entry 7AEJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 LEU 518ASN 706
A
 GLY 527VAL 693
B
 LEU 518ALA 700
D
 GLU 1SER 112
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7AEJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
518 530Right-handed alpha
Helix 2
AA2
C
531 589Right-handed alpha
Helix 3
AA3
C
628 671Right-handed alpha
Helix 4
AA4
C
673 706Right-handed alpha
Helix 5
AA5
A
533 589Right-handed alpha
Helix 6
AA6
A
630 662Right-handed alpha
Helix 7
AA7
A
673 693Right-handed alpha
Helix 8
AA8
B
519 530Right-handed alpha
Helix 9
AA9
B
530 588Right-handed alpha
Helix 10
AB1
B
628 700Right-handed alpha
Helix 11
AB2
D
61 64Right-handed 310
Helix 12
AB3
D
83 87Right-handed 310
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There are 3 sheets in PDB entry 7AEJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 7first strand
Strand 2
D
18 24anti-parallel
Strand 3
D
77 82anti-parallel
Strand 4
D
67 72anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
107 111parallel
Strand 3
D
88 96anti-parallel
Strand 4
D
33 39anti-parallel
Strand 5
D
45 52anti-parallel
Strand 6
D
58 59anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
107 111parallel
Strand 3
D
88 96anti-parallel
Strand 4
D
100 103anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il