Analysis of interatomic Contacts of Structural Units in PDB entry:
7AEO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7AEO entry

There are 3 chains in PDB entry 7AEO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 91TRP 583
B
 T 1 C 16
C
 G 1 A 16
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7AEO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
124 127Right-handed 310
Helix 2
AA2
A
168 185Right-handed alpha
Helix 3
AA3
A
235 246Right-handed alpha
Helix 4
AA4
A
247 260Right-handed alpha
Helix 5
AA5
A
261 265Right-handed 310
Helix 6
AA6
A
271 291Right-handed alpha
Helix 7
AA7
A
296 309Right-handed alpha
Helix 8
AA8
A
323 336Right-handed alpha
Helix 9
AA9
A
356 366Right-handed alpha
Helix 10
AB1
A
376 389Right-handed alpha
Helix 11
AB2
A
411 416Right-handed alpha
Helix 12
AB3
A
431 433Right-handed 310
Helix 13
AB4
A
434 442Right-handed alpha
Helix 14
AB5
A
466 472Right-handed alpha
Helix 15
AB6
A
473 475Right-handed 310
Helix 16
AB7
A
504 510Right-handed 310
Helix 17
AB8
A
525 528Right-handed 310
Helix 18
AB9
A
563 565Right-handed 310
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There are 8 sheets in PDB entry 7AEO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 107first strand
Strand 2
A
128 139anti-parallel
Strand 3
A
145 153anti-parallel
Strand 4
A
159 166anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 107first strand
Strand 2
A
128 139anti-parallel
Strand 3
A
116 123anti-parallel
Strand 4
A
202 204anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 110first strand
Strand 2
A
113 114anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 368first strand
Strand 2
A
408 409anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 406first strand
Strand 2
A
567 579anti-parallel
Strand 3
A
484 491anti-parallel
Strand 4
A
423 429anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 463first strand
Strand 2
A
558 561anti-parallel
Strand 3
A
514 517anti-parallel
Strand 4
A
495 498parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 543first strand
Strand 2
A
519 523anti-parallel
Strand 3
A
554 556parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
529 531first strand
Strand 2
A
534 536anti-parallel
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