Analysis of interatomic Contacts of Structural Units in PDB entry:
7AER


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7AER entry

There are 4 chains in PDB entry 7AER (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1ALA 127
B
 MSE 1GLU 133
C
 ASN 2GLU 133
D
 ASN 2GLU 133
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 7AER. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 17Right-handed alpha
Helix 2
AA2
A
51 67Right-handed alpha
Helix 3
AA3
A
79 89Right-handed alpha
Helix 4
AA4
A
96 118Right-handed alpha
Helix 5
AA5
A
118 126Right-handed alpha
Helix 6
AA6
B
2 23Right-handed alpha
Helix 7
AA7
B
28 31Right-handed 310
Helix 8
AA8
B
32 61Right-handed alpha
Helix 9
AA9
B
68 79Right-handed alpha
Helix 10
AB1
B
83 102Right-handed alpha
Helix 11
AB2
B
108 119Right-handed alpha
Helix 12
AB3
B
119 133Right-handed alpha
Helix 13
AB4
C
3 24Right-handed alpha
Helix 14
AB5
C
28 31Right-handed 310
Helix 15
AB6
C
32 62Right-handed alpha
Helix 16
AB7
C
70 79Right-handed alpha
Helix 17
AB8
C
83 102Right-handed alpha
Helix 18
AB9
C
108 119Right-handed alpha
Helix 19
AC1
C
119 133Right-handed alpha
Helix 20
AC2
D
3 24Right-handed alpha
Helix 21
AC3
D
32 61Right-handed alpha
Helix 22
AC4
D
68 79Right-handed alpha
Helix 23
AC5
D
83 95Right-handed alpha
Helix 24
AC6
D
96 102Right-handed alpha
Helix 25
AC7
D
108 119Right-handed alpha
Helix 26
AC8
D
119 133Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7AER.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 74first strand
Strand 2
A
39 46parallel
Strand 3
A
20 26anti-parallel
Strand 4
A
91 94anti-parallel
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