Analysis of interatomic Contacts of Structural Units in PDB entry:
7AG6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7AG6 entry

There are 2 chains in PDB entry 7AG6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 302
B
 MET 1VAL 298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7AG6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 51Right-handed alpha
Helix 2
AA2
A
64 77Right-handed alpha
Helix 3
AA3
A
119 125Right-handed 310
Helix 4
AA4
A
126 130Right-handed 310
Helix 5
AA5
A
139 154Right-handed alpha
Helix 6
AA6
A
168 174Right-handed alpha
Helix 7
AA7
A
182 190Right-handed alpha
Helix 8
AA8
A
193 203Right-handed alpha
Helix 9
AA9
A
214 216Right-handed 310
Helix 10
AB1
A
241 258Right-handed alpha
Helix 11
AB2
A
259 275Right-handed alpha
Helix 12
AB3
A
286 296Right-handed alpha
Helix 13
AB4
A
297 300Right-handed 310
Helix 14
AB5
B
39 51Right-handed alpha
Helix 15
AB6
B
64 77Right-handed alpha
Helix 16
AB7
B
119 125Right-handed 310
Helix 17
AB8
B
126 130Right-handed 310
Helix 18
AB9
B
139 153Right-handed alpha
Helix 19
AC1
B
168 174Right-handed alpha
Helix 20
AC2
B
182 190Right-handed alpha
Helix 21
AC3
B
193 203Right-handed alpha
Helix 22
AC4
B
214 216Right-handed 310
Helix 23
AC5
B
241 257Right-handed alpha
Helix 24
AC6
B
259 275Right-handed alpha
Helix 25
AC7
B
286 295Right-handed alpha
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There are 6 sheets in PDB entry 7AG6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 80first strand
Strand 2
A
54 58parallel
Strand 3
A
3 7parallel
Strand 4
A
132 136parallel
Strand 5
A
156 161parallel
Strand 6
A
177 181parallel
Strand 7
A
208 212parallel
Strand 8
A
218 222anti-parallel
Strand 9
A
225 229anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 38first strand
Strand 2
A
11 17anti-parallel
Strand 3
A
93 99parallel
Strand 4
A
105 110anti-parallel
Strand 5
B
26 29parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 29first strand
Strand 2
B
105 110parallel
Strand 3
B
93 99anti-parallel
Strand 4
B
11 17parallel
Strand 5
B
32 38anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
85 86parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 80first strand
Strand 2
B
54 58parallel
Strand 3
B
3 7parallel
Strand 4
B
132 136parallel
Strand 5
B
156 161parallel
Strand 6
B
177 181parallel
Strand 7
B
208 212parallel
Strand 8
B
218 222anti-parallel
Strand 9
B
225 229anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 62first strand
Strand 2
B
85 87parallel
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