Analysis of interatomic Contacts of Structural Units in PDB entry:
7AGH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7AGH entry

There are 4 chains in PDB entry 7AGH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 MET 1LEU 296
D
 MET 1LEU 296
A
 MET 1PHE 297
B
 MET 1LEU 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 7AGH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
39 51Right-handed alpha
Helix 2
AA2
C
64 77Right-handed alpha
Helix 3
AA3
C
119 125Right-handed 310
Helix 4
AA4
C
126 130Right-handed 310
Helix 5
AA5
C
139 153Right-handed alpha
Helix 6
AA6
C
168 174Right-handed alpha
Helix 7
AA7
C
182 190Right-handed alpha
Helix 8
AA8
C
193 203Right-handed alpha
Helix 9
AA9
C
214 216Right-handed 310
Helix 10
AB1
C
241 258Right-handed alpha
Helix 11
AB2
C
259 276Right-handed alpha
Helix 12
AB3
C
286 296Right-handed alpha
Helix 13
AB4
D
39 51Right-handed alpha
Helix 14
AB5
D
64 77Right-handed alpha
Helix 15
AB6
D
119 125Right-handed 310
Helix 16
AB7
D
126 130Right-handed 310
Helix 17
AB8
D
139 153Right-handed alpha
Helix 18
AB9
D
168 174Right-handed alpha
Helix 19
AC1
D
182 190Right-handed alpha
Helix 20
AC2
D
193 203Right-handed alpha
Helix 21
AC3
D
214 216Right-handed 310
Helix 22
AC4
D
241 258Right-handed alpha
Helix 23
AC5
D
259 275Right-handed alpha
Helix 24
AC6
D
286 296Right-handed alpha
Helix 25
AC7
A
39 51Right-handed alpha
Helix 26
AC8
A
64 77Right-handed alpha
Helix 27
AC9
A
119 125Right-handed 310
Helix 28
AD1
A
126 130Right-handed 310
Helix 29
AD2
A
139 153Right-handed alpha
Helix 30
AD3
A
168 174Right-handed alpha
Helix 31
AD4
A
182 190Right-handed alpha
Helix 32
AD5
A
193 203Right-handed alpha
Helix 33
AD6
A
214 216Right-handed 310
Helix 34
AD7
A
241 258Right-handed alpha
Helix 35
AD8
A
259 275Right-handed alpha
Helix 36
AD9
A
286 296Right-handed alpha
Helix 37
AE1
B
39 51Right-handed alpha
Helix 38
AE2
B
64 77Right-handed alpha
Helix 39
AE3
B
119 125Right-handed 310
Helix 40
AE4
B
126 130Right-handed 310
Helix 41
AE5
B
139 153Right-handed alpha
Helix 42
AE6
B
168 174Right-handed alpha
Helix 43
AE7
B
182 190Right-handed alpha
Helix 44
AE8
B
193 203Right-handed alpha
Helix 45
AE9
B
214 216Right-handed 310
Helix 46
AF1
B
241 258Right-handed alpha
Helix 47
AF2
B
259 275Right-handed alpha
Helix 48
AF3
B
286 296Right-handed alpha
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There are 12 sheets in PDB entry 7AGH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
79 80first strand
Strand 2
C
54 58parallel
Strand 3
C
3 7parallel
Strand 4
C
132 136parallel
Strand 5
C
156 161parallel
Strand 6
C
177 181parallel
Strand 7
C
208 212parallel
Strand 8
C
218 222anti-parallel
Strand 9
C
225 229anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 38first strand
Strand 2
C
11 17anti-parallel
Strand 3
C
94 99parallel
Strand 4
C
105 110anti-parallel
Strand 5
B
26 29parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 29first strand
Strand 2
B
105 110parallel
Strand 3
B
93 99anti-parallel
Strand 4
B
11 17parallel
Strand 5
B
32 38anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 62first strand
Strand 2
C
85 87parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
79 80first strand
Strand 2
D
54 58parallel
Strand 3
D
3 7parallel
Strand 4
D
132 136parallel
Strand 5
D
156 161parallel
Strand 6
D
177 181parallel
Strand 7
D
208 212parallel
Strand 8
D
218 222anti-parallel
Strand 9
D
225 229anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
32 38first strand
Strand 2
D
11 17anti-parallel
Strand 3
D
93 99parallel
Strand 4
D
105 110anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
60 62first strand
Strand 2
D
85 87parallel
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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 80first strand
Strand 2
A
54 58parallel
Strand 3
A
3 7parallel
Strand 4
A
132 136parallel
Strand 5
A
156 161parallel
Strand 6
A
177 181parallel
Strand 7
A
208 212parallel
Strand 8
A
218 220anti-parallel
Strand 9
A
227 229anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 38first strand
Strand 2
A
11 17anti-parallel
Strand 3
A
93 99parallel
Strand 4
A
105 110anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
85 86parallel
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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 80first strand
Strand 2
B
54 58parallel
Strand 3
B
3 7parallel
Strand 4
B
132 136parallel
Strand 5
B
156 161parallel
Strand 6
B
177 181parallel
Strand 7
B
208 212parallel
Strand 8
B
218 222anti-parallel
Strand 9
B
225 229anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 61first strand
Strand 2
B
85 86parallel
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