Analysis of interatomic Contacts of Structural Units in PDB entry:
7AHB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7AHB entry

There are 2 chains in PDB entry 7AHB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 539ALA 872
B
 PRO 538ALA 872
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 32 helices in PDB entry 7AHB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
544 552Right-handed alpha
Helix 2
AA2
A
586 593Right-handed alpha
Helix 3
AA3
A
593 612Right-handed alpha
Helix 4
AA4
A
614 621Right-handed alpha
Helix 5
AA5
A
627 649Right-handed alpha
Helix 6
AA6
A
662 670Right-handed alpha
Helix 7
AA7
A
674 690Right-handed alpha
Helix 8
AA8
A
691 693Right-handed 310
Helix 9
AA9
A
704 712Right-handed alpha
Helix 10
AB1
A
734 748Right-handed alpha
Helix 11
AB2
A
763 768Right-handed 310
Helix 12
AB3
A
769 777Right-handed alpha
Helix 13
AB4
A
808 818Right-handed alpha
Helix 14
AB5
A
821 831Right-handed alpha
Helix 15
AB6
A
845 857Right-handed alpha
Helix 16
AB7
A
858 862Right-handed 310
Helix 17
AB8
B
544 552Right-handed alpha
Helix 18
AB9
B
586 593Right-handed alpha
Helix 19
AC1
B
593 612Right-handed alpha
Helix 20
AC2
B
614 622Right-handed alpha
Helix 21
AC3
B
627 649Right-handed alpha
Helix 22
AC4
B
662 670Right-handed alpha
Helix 23
AC5
B
674 690Right-handed alpha
Helix 24
AC6
B
691 693Right-handed 310
Helix 25
AC7
B
704 712Right-handed alpha
Helix 26
AC8
B
734 748Right-handed alpha
Helix 27
AC9
B
763 768Right-handed 310
Helix 28
AD1
B
769 777Right-handed alpha
Helix 29
AD2
B
808 818Right-handed alpha
Helix 30
AD3
B
822 830Right-handed alpha
Helix 31
AD4
B
845 857Right-handed alpha
Helix 32
AD5
B
858 862Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 7AHB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
789 791first strand
Strand 2
A
655 658parallel
Strand 3
A
571 575parallel
Strand 4
A
835 838parallel
Strand 5
A
863 865parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
719 723first strand
Strand 2
A
729 733anti-parallel
Strand 3
A
697 701anti-parallel
Strand 4
A
752 754anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
789 791first strand
Strand 2
B
655 658parallel
Strand 3
B
571 575parallel
Strand 4
B
835 839parallel
Strand 5
B
863 865parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
752 754first strand
Strand 2
B
697 701anti-parallel
Strand 3
B
729 733anti-parallel
Strand 4
B
719 723anti-parallel
Strand 5
B
820 821parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il