Analysis of interatomic Contacts of Structural Units in PDB entry:
7AIB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7AIB entry

There are 5 chains in PDB entry 7AIB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 128SER 800
B
 ARG 128SER 800
C
 VAL 20GLN 331
D
 A 11 A 40
E
 T 11 T 40
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 7AIB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
162 174Right-handed alpha
Helix 2
AA2
A
186 190Right-handed 310
Helix 3
AA3
A
201 204Right-handed 310
Helix 4
AA4
A
205 218Right-handed alpha
Helix 5
AA5
A
222 226Right-handed 310
Helix 6
AA6
A
230 248Right-handed alpha
Helix 7
AA7
A
270 278Right-handed alpha
Helix 8
AA8
A
290 296Right-handed alpha
Helix 9
AA9
A
300 313Right-handed alpha
Helix 10
AB1
A
317 332Right-handed alpha
Helix 11
AB2
A
334 343Right-handed alpha
Helix 12
AB3
A
347 357Right-handed alpha
Helix 13
AB4
A
361 373Right-handed alpha
Helix 14
AB5
A
374 382Right-handed alpha
Helix 15
AB6
A
387 398Right-handed alpha
Helix 16
AB7
A
400 411Right-handed alpha
Helix 17
AB8
A
430 442Right-handed alpha
Helix 18
AB9
A
443 459Right-handed alpha
Helix 19
AC1
A
479 483Right-handed alpha
Helix 20
AC2
A
503 536Right-handed alpha
Helix 21
AC3
A
538 565Right-handed alpha
Helix 22
AC4
A
587 592Right-handed alpha
Helix 23
AC5
A
619 635Right-handed alpha
Helix 24
AC6
A
673 684Right-handed alpha
Helix 25
AC7
A
700 718Right-handed alpha
Helix 26
AC8
A
729 735Right-handed 310
Helix 27
AC9
A
771 779Right-handed alpha
Helix 28
AD1
A
782 797Right-handed alpha
Helix 29
AD2
B
162 174Right-handed alpha
Helix 30
AD3
B
186 190Right-handed 310
Helix 31
AD4
B
201 204Right-handed 310
Helix 32
AD5
B
205 218Right-handed alpha
Helix 33
AD6
B
222 226Right-handed 310
Helix 34
AD7
B
230 248Right-handed alpha
Helix 35
AD8
B
270 277Right-handed alpha
Helix 36
AD9
B
290 296Right-handed alpha
Helix 37
AE1
B
300 313Right-handed alpha
Helix 38
AE2
B
317 343Right-handed alpha
Helix 39
AE3
B
347 357Right-handed alpha
Helix 40
AE4
B
361 373Right-handed alpha
Helix 41
AE5
B
374 382Right-handed alpha
Helix 42
AE6
B
387 398Right-handed alpha
Helix 43
AE7
B
400 411Right-handed alpha
Helix 44
AE8
B
430 442Right-handed alpha
Helix 45
AE9
B
443 459Right-handed alpha
Helix 46
AF1
B
479 483Right-handed alpha
Helix 47
AF2
B
503 536Right-handed alpha
Helix 48
AF3
B
538 566Right-handed alpha
Helix 49
AF4
B
587 592Right-handed alpha
Helix 50
AF5
B
619 635Right-handed alpha
Helix 51
AF6
B
672 684Right-handed alpha
Helix 52
AF7
B
702 718Right-handed alpha
Helix 53
AF8
B
729 735Right-handed 310
Helix 54
AF9
B
771 779Right-handed alpha
Helix 55
AG1
B
782 797Right-handed alpha
Helix 56
AG2
C
22 37Right-handed alpha
Helix 57
AG3
C
64 73Right-handed alpha
Helix 58
AG4
C
96 103Right-handed alpha
Helix 59
AG5
C
155 161Right-handed alpha
Helix 60
AG6
C
165 182Right-handed alpha
Helix 61
AG7
C
208 223Right-handed alpha
Helix 62
AG8
C
243 246Right-handed 310
Helix 63
AG9
C
249 252Right-handed 310
Helix 64
AH1
C
265 276Right-handed alpha
Helix 65
AH2
C
316 331Right-handed alpha
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There are 10 sheets in PDB entry 7AIB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 158first strand
Strand 2
A
143 149anti-parallel
Strand 3
A
132 138anti-parallel
Strand 4
A
177 181parallel
Strand 5
A
196 199parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 269first strand
Strand 2
A
652 655parallel
Strand 3
A
689 693parallel
Strand 4
A
722 726parallel
Strand 5
A
609 613parallel
Strand 6
A
742 752parallel
Strand 7
A
755 764anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 466first strand
Strand 2
A
474 478anti-parallel
Strand 3
A
498 502anti-parallel
Strand 4
A
490 494anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
571 572first strand
Strand 2
A
644 647parallel
Strand 3
A
578 583anti-parallel
Strand 4
A
599 602anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
196 199first strand
Strand 2
B
177 181parallel
Strand 3
B
132 138parallel
Strand 4
B
143 149anti-parallel
Strand 5
B
156 158anti-parallel
Strand 6
B
259 260parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
268 269first strand
Strand 2
B
652 655parallel
Strand 3
B
689 693parallel
Strand 4
B
722 726parallel
Strand 5
B
609 613parallel
Strand 6
B
742 752parallel
Strand 7
B
755 763anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
464 466first strand
Strand 2
B
474 478anti-parallel
Strand 3
B
498 502anti-parallel
Strand 4
B
490 494anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
571 572first strand
Strand 2
B
644 647parallel
Strand 3
B
578 583anti-parallel
Strand 4
B
599 602anti-parallel
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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
135 136first strand
Strand 2
C
121 122anti-parallel
Strand 3
C
110 113anti-parallel
Strand 4
C
142 147anti-parallel
Strand 5
C
53 58anti-parallel
Strand 6
C
41 47anti-parallel
Strand 7
C
186 191parallel
Strand 8
C
194 199anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
224 231first strand
Strand 2
C
234 241anti-parallel
Strand 3
C
288 293anti-parallel
Strand 4
C
254 258parallel
Strand 5
C
261 262anti-parallel
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