Analysis of interatomic Contacts of Structural Units in PDB entry:
7AJ0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7AJ0 entry

There are 2 chains in PDB entry 7AJ0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 21	GLY 521
B	ASN 21	GLY 165

There are145 helices in PDB entry 7AJ0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	39	58	Right-handed alpha
Helix 2	AA2	A	76	80	Right-handed 310
Helix 3	AA3	A	81	86	Right-handed 310
Helix 4	AA4	A	89	98	Right-handed alpha
Helix 5	AA5	A	110	121	Right-handed alpha
Helix 6	AA6	A	123	128	Right-handed alpha
Helix 7	AA7	A	142	147	Right-handed alpha
Helix 8	AA8	A	149	156	Right-handed alpha
Helix 9	AA9	A	176	180	Right-handed 310
Helix 10	AB1	A	191	197	Right-handed alpha
Helix 11	AB2	A	204	209	Right-handed alpha
Helix 12	AB3	A	210	218	Right-handed alpha
Helix 13	AB4	A	219	221	Right-handed 310
Helix 14	AB5	A	242	248	Right-handed alpha
Helix 15	AB6	A	248	268	Right-handed alpha
Helix 16	AB7	A	287	291	Right-handed 310
Helix 17	AB8	A	298	321	Right-handed alpha
Helix 18	AB9	A	323	325	Right-handed 310
Helix 19	AC1	A	338	342	Right-handed 310
Helix 20	AC2	A	358	362	Right-handed alpha
Helix 21	AC3	A	386	397	Right-handed alpha
Helix 22	AC4	A	399	403	Right-handed 310
Helix 23	AC5	A	414	419	Right-handed alpha
Helix 24	AC6	A	489	494	Right-handed 310
Helix 25	AC7	A	497	515	Right-handed alpha
Helix 26	AC8	B	39	58	Right-handed alpha
Helix 27	AC9	B	76	80	Right-handed 310
Helix 28	AD1	B	81	86	Right-handed 310
Helix 29	AD2	B	89	98	Right-handed alpha
Helix 30	AD3	B	110	121	Right-handed alpha
Helix 31	AD4	B	123	128	Right-handed alpha
Helix 32	AD5	B	142	146	Right-handed 310
Helix 33	AD6	B	149	156	Right-handed alpha
Helix 34	AD7	B	176	180	Right-handed 310
Helix 35	AD8	B	191	197	Right-handed alpha
Helix 36	AD9	B	204	209	Right-handed alpha
Helix 37	AE1	B	210	218	Right-handed alpha
Helix 38	AE2	B	219	221	Right-handed 310
Helix 39	AE3	B	242	247	Right-handed alpha
Helix 40	AE4	B	248	267	Right-handed alpha
Helix 41	AE5	B	287	291	Right-handed 310
Helix 42	AE6	B	298	321	Right-handed alpha
Helix 43	AE7	B	323	325	Right-handed 310
Helix 44	AE8	B	338	342	Right-handed 310
Helix 45	AE9	B	358	362	Right-handed alpha
Helix 46	AF1	B	386	398	Right-handed alpha
Helix 47	AF2	B	399	403	Right-handed 310
Helix 48	AF3	B	414	419	Right-handed alpha
Helix 49	AF4	B	497	515	Right-handed alpha
Helix 50	AF5	C	39	58	Right-handed alpha
Helix 51	AF6	C	76	80	Right-handed 310
Helix 52	AF7	C	81	86	Right-handed 310
Helix 53	AF8	C	89	98	Right-handed alpha
Helix 54	AF9	C	110	121	Right-handed alpha
Helix 55	AG1	C	123	128	Right-handed alpha
Helix 56	AG2	C	142	146	Right-handed 310
Helix 57	AG3	C	149	157	Right-handed alpha
Helix 58	AG4	C	176	180	Right-handed 310
Helix 59	AG5	C	191	197	Right-handed alpha
Helix 60	AG6	C	204	209	Right-handed alpha
Helix 61	AG7	C	210	218	Right-handed alpha
Helix 62	AG8	C	219	221	Right-handed 310
Helix 63	AG9	C	242	247	Right-handed alpha
Helix 64	AH1	C	248	267	Right-handed alpha
Helix 65	AH2	C	287	291	Right-handed 310
Helix 66	AH3	C	298	321	Right-handed alpha
Helix 67	AH4	C	323	325	Right-handed 310
Helix 68	AH5	C	338	342	Right-handed 310
Helix 69	AH6	C	358	362	Right-handed alpha
Helix 70	AH7	C	386	398	Right-handed alpha
Helix 71	AH8	C	399	403	Right-handed 310
Helix 72	AH9	C	414	419	Right-handed alpha
Helix 73	AI1	C	497	515	Right-handed alpha
Helix 74	AI2	D	39	58	Right-handed alpha
Helix 75	AI3	D	76	80	Right-handed 310
Helix 76	AI4	D	81	86	Right-handed 310
Helix 77	AI5	D	89	98	Right-handed alpha
Helix 78	AI6	D	110	121	Right-handed alpha
Helix 79	AI7	D	123	128	Right-handed alpha
Helix 80	AI8	D	142	146	Right-handed 310
Helix 81	AI9	D	149	156	Right-handed alpha
Helix 82	AJ1	D	176	180	Right-handed 310
Helix 83	AJ2	D	191	197	Right-handed alpha
Helix 84	AJ3	D	204	209	Right-handed alpha
Helix 85	AJ4	D	210	218	Right-handed alpha
Helix 86	AJ5	D	219	221	Right-handed 310
Helix 87	AJ6	D	242	248	Right-handed alpha
Helix 88	AJ7	D	248	267	Right-handed alpha
Helix 89	AJ8	D	287	291	Right-handed 310
Helix 90	AJ9	D	298	321	Right-handed alpha
Helix 91	AK1	D	323	325	Right-handed 310
Helix 92	AK2	D	338	342	Right-handed 310
Helix 93	AK3	D	358	362	Right-handed alpha
Helix 94	AK4	D	386	398	Right-handed alpha
Helix 95	AK5	D	399	403	Right-handed 310
Helix 96	AK6	D	414	419	Right-handed alpha
Helix 97	AK7	D	497	515	Right-handed alpha
Helix 98	AK8	E	39	58	Right-handed alpha
Helix 99	AK9	E	76	80	Right-handed 310
Helix 100	AL1	E	81	86	Right-handed 310
Helix 101	AL2	E	89	98	Right-handed alpha
Helix 102	AL3	E	110	121	Right-handed alpha
Helix 103	AL4	E	123	128	Right-handed alpha
Helix 104	AL5	E	142	146	Right-handed 310
Helix 105	AL6	E	149	156	Right-handed alpha
Helix 106	AL7	E	176	180	Right-handed 310
Helix 107	AL8	E	191	197	Right-handed alpha
Helix 108	AL9	E	204	209	Right-handed alpha
Helix 109	AM1	E	210	218	Right-handed alpha
Helix 110	AM2	E	219	221	Right-handed 310
Helix 111	AM3	E	242	248	Right-handed alpha
Helix 112	AM4	E	248	267	Right-handed alpha
Helix 113	AM5	E	287	291	Right-handed 310
Helix 114	AM6	E	298	321	Right-handed alpha
Helix 115	AM7	E	323	325	Right-handed 310
Helix 116	AM8	E	338	342	Right-handed 310
Helix 117	AM9	E	358	362	Right-handed alpha
Helix 118	AN1	E	386	398	Right-handed alpha
Helix 119	AN2	E	399	403	Right-handed 310
Helix 120	AN3	E	414	419	Right-handed alpha
Helix 121	AN4	E	497	515	Right-handed alpha
Helix 122	AN5	F	39	58	Right-handed alpha
Helix 123	AN6	F	76	80	Right-handed 310
Helix 124	AN7	F	81	86	Right-handed 310
Helix 125	AN8	F	89	98	Right-handed alpha
Helix 126	AN9	F	110	121	Right-handed alpha
Helix 127	AO1	F	123	128	Right-handed alpha
Helix 128	AO2	F	142	146	Right-handed 310
Helix 129	AO3	F	149	156	Right-handed alpha
Helix 130	AO4	F	176	180	Right-handed 310
Helix 131	AO5	F	191	197	Right-handed alpha
Helix 132	AO6	F	204	209	Right-handed alpha
Helix 133	AO7	F	210	218	Right-handed alpha
Helix 134	AO8	F	219	221	Right-handed 310
Helix 135	AO9	F	242	248	Right-handed alpha
Helix 136	AP1	F	248	268	Right-handed alpha
Helix 137	AP2	F	287	291	Right-handed 310
Helix 138	AP3	F	298	321	Right-handed alpha
Helix 139	AP4	F	323	325	Right-handed 310
Helix 140	AP5	F	338	342	Right-handed 310
Helix 141	AP6	F	358	362	Right-handed alpha
Helix 142	AP7	F	386	398	Right-handed alpha
Helix 143	AP8	F	399	403	Right-handed 310
Helix 144	AP9	F	414	420	Right-handed alpha
Helix 145	AQ1	F	497	515	Right-handed alpha

There are 24 sheets in PDB entry 7AJ0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	239	first strand
Strand 2	A	224	229	anti-parallel
Strand 3	A	184	188	anti-parallel
Strand 4	A	160	166	parallel
Strand 5	A	271	276	parallel
Strand 6	A	62	68	parallel
Strand 7	A	327	333	parallel
Strand 8	A	363	369	anti-parallel
Strand 9	A	100	106	anti-parallel
Strand 10	A	378	380	parallel

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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	239	first strand
Strand 2	A	224	229	anti-parallel
Strand 3	A	184	188	anti-parallel
Strand 4	A	160	166	parallel
Strand 5	A	271	276	parallel
Strand 6	A	62	68	parallel
Strand 7	A	327	333	parallel
Strand 8	A	363	369	anti-parallel
Strand 9	A	100	106	anti-parallel
Strand 10	A	384	385	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	429	434	first strand
Strand 2	A	437	443	anti-parallel
Strand 3	A	446	449	anti-parallel
Strand 4	A	475	478	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	451	455	first strand
Strand 2	A	465	469	anti-parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	235	239	first strand
Strand 2	B	224	229	anti-parallel
Strand 3	B	184	187	anti-parallel
Strand 4	B	160	165	parallel
Strand 5	B	271	276	parallel
Strand 6	B	62	68	parallel
Strand 7	B	327	333	parallel
Strand 8	B	363	369	anti-parallel
Strand 9	B	100	106	anti-parallel
Strand 10	B	378	380	parallel

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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	235	239	first strand
Strand 2	B	224	229	anti-parallel
Strand 3	B	184	187	anti-parallel
Strand 4	B	160	165	parallel
Strand 5	B	271	276	parallel
Strand 6	B	62	68	parallel
Strand 7	B	327	333	parallel
Strand 8	B	363	369	anti-parallel
Strand 9	B	100	106	anti-parallel
Strand 10	B	384	385	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	429	434	first strand
Strand 2	B	437	443	anti-parallel
Strand 3	B	446	449	anti-parallel
Strand 4	B	475	478	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	451	455	first strand
Strand 2	B	465	469	anti-parallel

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There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	235	239	first strand
Strand 2	C	224	229	anti-parallel
Strand 3	C	184	188	anti-parallel
Strand 4	C	160	166	parallel
Strand 5	C	271	276	parallel
Strand 6	C	62	68	parallel
Strand 7	C	327	333	parallel
Strand 8	C	363	369	anti-parallel
Strand 9	C	100	106	anti-parallel
Strand 10	C	378	380	parallel

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There are 10 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	235	239	first strand
Strand 2	C	224	229	anti-parallel
Strand 3	C	184	188	anti-parallel
Strand 4	C	160	166	parallel
Strand 5	C	271	276	parallel
Strand 6	C	62	68	parallel
Strand 7	C	327	333	parallel
Strand 8	C	363	369	anti-parallel
Strand 9	C	100	106	anti-parallel
Strand 10	C	384	385	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	429	434	first strand
Strand 2	C	437	443	anti-parallel
Strand 3	C	446	449	anti-parallel
Strand 4	C	475	478	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	455	first strand
Strand 2	C	465	469	anti-parallel

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There are 10 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	235	239	first strand
Strand 2	D	224	229	anti-parallel
Strand 3	D	184	188	anti-parallel
Strand 4	D	160	166	parallel
Strand 5	D	271	276	parallel
Strand 6	D	62	68	parallel
Strand 7	D	327	333	parallel
Strand 8	D	363	369	anti-parallel
Strand 9	D	100	106	anti-parallel
Strand 10	D	378	380	parallel

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There are 10 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	235	239	first strand
Strand 2	D	224	229	anti-parallel
Strand 3	D	184	188	anti-parallel
Strand 4	D	160	166	parallel
Strand 5	D	271	276	parallel
Strand 6	D	62	68	parallel
Strand 7	D	327	333	parallel
Strand 8	D	363	369	anti-parallel
Strand 9	D	100	106	anti-parallel
Strand 10	D	384	385	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	429	434	first strand
Strand 2	D	437	443	anti-parallel
Strand 3	D	446	449	anti-parallel
Strand 4	D	475	478	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	451	455	first strand
Strand 2	D	465	469	anti-parallel

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There are 10 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	234	239	first strand
Strand 2	E	224	229	anti-parallel
Strand 3	E	184	187	anti-parallel
Strand 4	E	160	165	parallel
Strand 5	E	271	276	parallel
Strand 6	E	62	68	parallel
Strand 7	E	327	333	parallel
Strand 8	E	363	369	anti-parallel
Strand 9	E	100	106	anti-parallel
Strand 10	E	378	380	parallel

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There are 10 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	234	239	first strand
Strand 2	E	224	229	anti-parallel
Strand 3	E	184	187	anti-parallel
Strand 4	E	160	165	parallel
Strand 5	E	271	276	parallel
Strand 6	E	62	68	parallel
Strand 7	E	327	333	parallel
Strand 8	E	363	369	anti-parallel
Strand 9	E	100	106	anti-parallel
Strand 10	E	384	385	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	429	434	first strand
Strand 2	E	437	443	anti-parallel
Strand 3	E	446	449	anti-parallel
Strand 4	E	475	478	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	451	455	first strand
Strand 2	E	465	469	anti-parallel

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There are 10 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	235	239	first strand
Strand 2	F	224	229	anti-parallel
Strand 3	F	184	187	anti-parallel
Strand 4	F	160	165	parallel
Strand 5	F	271	276	parallel
Strand 6	F	62	68	parallel
Strand 7	F	327	333	parallel
Strand 8	F	363	369	anti-parallel
Strand 9	F	100	106	anti-parallel
Strand 10	F	378	380	parallel

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There are 10 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	235	239	first strand
Strand 2	F	224	229	anti-parallel
Strand 3	F	184	187	anti-parallel
Strand 4	F	160	165	parallel
Strand 5	F	271	276	parallel
Strand 6	F	62	68	parallel
Strand 7	F	327	333	parallel
Strand 8	F	363	369	anti-parallel
Strand 9	F	100	106	anti-parallel
Strand 10	F	384	385	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	429	434	first strand
Strand 2	F	437	443	anti-parallel
Strand 3	F	446	449	anti-parallel
Strand 4	F	475	478	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	451	455	first strand
Strand 2	F	465	469	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7AJ0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7AJ0