Analysis of interatomic Contacts of Structural Units in PDB entry:
7AOV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7AOV entry

There are 2 chains in PDB entry 7AOV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 33ARG 418
B
 LYS 33ARG 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 7AOV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 48Right-handed alpha
Helix 2
AA2
A
70 74Right-handed 310
Helix 3
AA3
A
75 79Right-handed 310
Helix 4
AA4
A
81 85Right-handed 310
Helix 5
AA5
A
126 137Right-handed alpha
Helix 6
AA6
A
159 178Right-handed alpha
Helix 7
AA7
A
188 199Right-handed alpha
Helix 8
AA8
A
221 223Right-handed 310
Helix 9
AA9
A
225 230Right-handed 310
Helix 10
AB1
A
274 287Right-handed alpha
Helix 11
AB2
A
309 322Right-handed alpha
Helix 12
AB3
A
333 345Right-handed alpha
Helix 13
AB4
A
346 350Right-handed 310
Helix 14
AB5
A
351 363Right-handed alpha
Helix 15
AB6
A
366 370Right-handed 310
Helix 16
AB7
A
371 387Right-handed alpha
Helix 17
AB8
A
388 390Right-handed 310
Helix 18
AB9
A
404 418Right-handed alpha
Helix 19
AC1
B
35 48Right-handed alpha
Helix 20
AC2
B
70 74Right-handed 310
Helix 21
AC3
B
75 79Right-handed 310
Helix 22
AC4
B
81 85Right-handed 310
Helix 23
AC5
B
126 137Right-handed alpha
Helix 24
AC6
B
159 178Right-handed alpha
Helix 25
AC7
B
188 199Right-handed alpha
Helix 26
AC8
B
221 223Right-handed 310
Helix 27
AC9
B
225 230Right-handed 310
Helix 28
AD1
B
274 288Right-handed alpha
Helix 29
AD2
B
309 322Right-handed alpha
Helix 30
AD3
B
333 345Right-handed alpha
Helix 31
AD4
B
346 350Right-handed 310
Helix 32
AD5
B
351 363Right-handed alpha
Helix 33
AD6
B
366 370Right-handed 310
Helix 34
AD7
B
371 387Right-handed alpha
Helix 35
AD8
B
388 390Right-handed 310
Helix 36
AD9
B
404 418Right-handed alpha
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There are 4 sheets in PDB entry 7AOV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 53first strand
Strand 2
A
95 99anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 239first strand
Strand 2
A
103 107parallel
Strand 3
A
116 122anti-parallel
Strand 4
A
259 264parallel
Strand 5
A
213 219parallel
Strand 6
A
180 183parallel
Strand 7
A
146 151parallel
Strand 8
A
301 306parallel
Strand 9
A
326 329parallel
Strand 10
A
392 395parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 53first strand
Strand 2
B
95 99anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
235 239first strand
Strand 2
B
103 107parallel
Strand 3
B
116 122anti-parallel
Strand 4
B
259 264parallel
Strand 5
B
213 219parallel
Strand 6
B
180 183parallel
Strand 7
B
146 151parallel
Strand 8
B
301 306parallel
Strand 9
B
326 329parallel
Strand 10
B
392 395parallel
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