Analysis of interatomic Contacts of Structural Units in PDB entry:
7AOY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7AOY entry

There are 9 chains in PDB entry 7AOY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	MET 1	LYS 228
A	MET 1	LYS 228
C	MET 1	LYS 228
D	MET 1	LYS 228
E	MET 1	LYS 228
F	MET 1	LYS 228
G	MET 1	LYS 228
H	MET 1	LYS 228
I	MET 1	LYS 228

There are135 helices in PDB entry 7AOY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	18	31	Right-handed alpha
Helix 2	AA2	B	35	45	Right-handed alpha
Helix 3	AA3	B	45	56	Right-handed alpha
Helix 4	AA4	B	77	81	Right-handed 310
Helix 5	AA5	B	91	107	Right-handed alpha
Helix 6	AA6	B	111	122	Right-handed alpha
Helix 7	AA7	B	124	130	Right-handed alpha
Helix 8	AA8	B	133	136	Right-handed 310
Helix 9	AA9	B	137	143	Right-handed alpha
Helix 10	AB1	B	147	151	Right-handed 310
Helix 11	AB2	B	157	168	Right-handed alpha
Helix 12	AB3	B	175	181	Right-handed alpha
Helix 13	AB4	B	189	197	Right-handed alpha
Helix 14	AB5	B	197	209	Right-handed alpha
Helix 15	AB6	B	220	228	Right-handed alpha
Helix 16	AB7	A	18	31	Right-handed alpha
Helix 17	AB8	A	35	45	Right-handed alpha
Helix 18	AB9	A	45	56	Right-handed alpha
Helix 19	AC1	A	77	81	Right-handed 310
Helix 20	AC2	A	91	107	Right-handed alpha
Helix 21	AC3	A	111	122	Right-handed alpha
Helix 22	AC4	A	124	130	Right-handed alpha
Helix 23	AC5	A	133	136	Right-handed 310
Helix 24	AC6	A	137	143	Right-handed alpha
Helix 25	AC7	A	147	151	Right-handed 310
Helix 26	AC8	A	157	168	Right-handed alpha
Helix 27	AC9	A	175	181	Right-handed alpha
Helix 28	AD1	A	189	197	Right-handed alpha
Helix 29	AD2	A	197	209	Right-handed alpha
Helix 30	AD3	A	220	228	Right-handed alpha
Helix 31	AD4	C	18	31	Right-handed alpha
Helix 32	AD5	C	35	45	Right-handed alpha
Helix 33	AD6	C	45	56	Right-handed alpha
Helix 34	AD7	C	77	81	Right-handed 310
Helix 35	AD8	C	91	107	Right-handed alpha
Helix 36	AD9	C	111	122	Right-handed alpha
Helix 37	AE1	C	124	130	Right-handed alpha
Helix 38	AE2	C	133	136	Right-handed 310
Helix 39	AE3	C	137	143	Right-handed alpha
Helix 40	AE4	C	147	151	Right-handed 310
Helix 41	AE5	C	157	168	Right-handed alpha
Helix 42	AE6	C	175	181	Right-handed alpha
Helix 43	AE7	C	189	197	Right-handed alpha
Helix 44	AE8	C	197	209	Right-handed alpha
Helix 45	AE9	C	220	228	Right-handed alpha
Helix 46	AF1	D	18	31	Right-handed alpha
Helix 47	AF2	D	35	45	Right-handed alpha
Helix 48	AF3	D	45	56	Right-handed alpha
Helix 49	AF4	D	77	81	Right-handed 310
Helix 50	AF5	D	91	107	Right-handed alpha
Helix 51	AF6	D	111	122	Right-handed alpha
Helix 52	AF7	D	124	130	Right-handed alpha
Helix 53	AF8	D	133	136	Right-handed 310
Helix 54	AF9	D	137	143	Right-handed alpha
Helix 55	AG1	D	147	151	Right-handed 310
Helix 56	AG2	D	157	168	Right-handed alpha
Helix 57	AG3	D	175	181	Right-handed alpha
Helix 58	AG4	D	189	197	Right-handed alpha
Helix 59	AG5	D	197	209	Right-handed alpha
Helix 60	AG6	D	220	228	Right-handed alpha
Helix 61	AG7	E	18	31	Right-handed alpha
Helix 62	AG8	E	35	45	Right-handed alpha
Helix 63	AG9	E	45	56	Right-handed alpha
Helix 64	AH1	E	77	81	Right-handed 310
Helix 65	AH2	E	91	107	Right-handed alpha
Helix 66	AH3	E	111	122	Right-handed alpha
Helix 67	AH4	E	124	130	Right-handed alpha
Helix 68	AH5	E	133	136	Right-handed 310
Helix 69	AH6	E	137	143	Right-handed alpha
Helix 70	AH7	E	147	151	Right-handed 310
Helix 71	AH8	E	157	168	Right-handed alpha
Helix 72	AH9	E	175	181	Right-handed alpha
Helix 73	AI1	E	189	197	Right-handed alpha
Helix 74	AI2	E	197	209	Right-handed alpha
Helix 75	AI3	E	220	228	Right-handed alpha
Helix 76	AI4	F	18	31	Right-handed alpha
Helix 77	AI5	F	35	45	Right-handed alpha
Helix 78	AI6	F	45	56	Right-handed alpha
Helix 79	AI7	F	77	81	Right-handed 310
Helix 80	AI8	F	91	107	Right-handed alpha
Helix 81	AI9	F	111	122	Right-handed alpha
Helix 82	AJ1	F	124	130	Right-handed alpha
Helix 83	AJ2	F	133	136	Right-handed 310
Helix 84	AJ3	F	137	143	Right-handed alpha
Helix 85	AJ4	F	147	151	Right-handed 310
Helix 86	AJ5	F	157	168	Right-handed alpha
Helix 87	AJ6	F	175	181	Right-handed alpha
Helix 88	AJ7	F	189	197	Right-handed alpha
Helix 89	AJ8	F	197	209	Right-handed alpha
Helix 90	AJ9	F	220	228	Right-handed alpha
Helix 91	AK1	G	18	31	Right-handed alpha
Helix 92	AK2	G	35	45	Right-handed alpha
Helix 93	AK3	G	45	56	Right-handed alpha
Helix 94	AK4	G	77	81	Right-handed 310
Helix 95	AK5	G	91	107	Right-handed alpha
Helix 96	AK6	G	111	122	Right-handed alpha
Helix 97	AK7	G	124	130	Right-handed alpha
Helix 98	AK8	G	133	136	Right-handed 310
Helix 99	AK9	G	137	143	Right-handed alpha
Helix 100	AL1	G	147	151	Right-handed 310
Helix 101	AL2	G	157	168	Right-handed alpha
Helix 102	AL3	G	175	181	Right-handed alpha
Helix 103	AL4	G	189	197	Right-handed alpha
Helix 104	AL5	G	197	209	Right-handed alpha
Helix 105	AL6	G	220	228	Right-handed alpha
Helix 106	AL7	H	18	31	Right-handed alpha
Helix 107	AL8	H	35	45	Right-handed alpha
Helix 108	AL9	H	45	56	Right-handed alpha
Helix 109	AM1	H	77	81	Right-handed 310
Helix 110	AM2	H	91	107	Right-handed alpha
Helix 111	AM3	H	111	122	Right-handed alpha
Helix 112	AM4	H	124	130	Right-handed alpha
Helix 113	AM5	H	133	136	Right-handed 310
Helix 114	AM6	H	137	143	Right-handed alpha
Helix 115	AM7	H	147	151	Right-handed 310
Helix 116	AM8	H	157	168	Right-handed alpha
Helix 117	AM9	H	175	181	Right-handed alpha
Helix 118	AN1	H	189	197	Right-handed alpha
Helix 119	AN2	H	197	209	Right-handed alpha
Helix 120	AN3	H	220	228	Right-handed alpha
Helix 121	AN4	I	18	31	Right-handed alpha
Helix 122	AN5	I	35	45	Right-handed alpha
Helix 123	AN6	I	45	56	Right-handed alpha
Helix 124	AN7	I	77	81	Right-handed 310
Helix 125	AN8	I	91	107	Right-handed alpha
Helix 126	AN9	I	111	122	Right-handed alpha
Helix 127	AO1	I	124	130	Right-handed alpha
Helix 128	AO2	I	133	136	Right-handed 310
Helix 129	AO3	I	137	143	Right-handed alpha
Helix 130	AO4	I	147	151	Right-handed 310
Helix 131	AO5	I	157	168	Right-handed alpha
Helix 132	AO6	I	175	181	Right-handed alpha
Helix 133	AO7	I	189	197	Right-handed alpha
Helix 134	AO8	I	197	209	Right-handed alpha
Helix 135	AO9	I	220	228	Right-handed alpha

There are 9 sheets in PDB entry 7AOY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	6	first strand
Strand 2	A	60	65	parallel
Strand 3	A	68	73	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	73	first strand
Strand 2	B	60	65	anti-parallel
Strand 3	C	3	6	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	73	first strand
Strand 2	C	60	65	anti-parallel
Strand 3	D	3	6	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	73	first strand
Strand 2	D	60	65	anti-parallel
Strand 3	E	3	6	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	68	73	first strand
Strand 2	E	60	65	anti-parallel
Strand 3	F	3	6	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	68	73	first strand
Strand 2	F	60	65	anti-parallel
Strand 3	G	3	6	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	68	73	first strand
Strand 2	G	60	65	anti-parallel
Strand 3	H	3	6	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	68	73	first strand
Strand 2	H	60	65	anti-parallel
Strand 3	I	3	6	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	60	65	first strand
Strand 2	I	68	73	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7AOY

Analysis of interatomic Contacts of Structural Units in PDB entry:
7AOY