Analysis of interatomic Contacts of Structural Units in PDB entry:
7AQH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7AQH entry

There are 8 chains in PDB entry 7AQH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TRP 393	ILE 485
D	TRP 393	ILE 485
C	TRP 393	ILE 485
G	TRP 393	ILE 485
H	TRP 393	ILE 485
B	TRP 393	ILE 485
E	TRP 393	ILE 485
F	TRP 393	ILE 485

There are no helices in PDB entry 7AQH

There are 21 sheets in PDB entry 7AQH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	394	395	first strand
Strand 2	A	401	411	anti-parallel
Strand 3	A	439	448	anti-parallel
Strand 4	A	451	457	anti-parallel
Strand 5	A	463	470	anti-parallel
Strand 6	A	417	421	anti-parallel
Strand 7	A	430	434	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	394	395	first strand
Strand 2	A	401	411	anti-parallel
Strand 3	A	483	484	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	394	395	first strand
Strand 2	D	401	411	anti-parallel
Strand 3	D	439	448	anti-parallel
Strand 4	D	451	457	anti-parallel
Strand 5	D	463	470	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	394	395	first strand
Strand 2	D	401	411	anti-parallel
Strand 3	D	483	484	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	417	420	first strand
Strand 2	D	430	434	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	394	395	first strand
Strand 2	C	401	411	anti-parallel
Strand 3	C	439	448	anti-parallel
Strand 4	C	451	457	anti-parallel
Strand 5	C	463	470	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	394	395	first strand
Strand 2	C	401	411	anti-parallel
Strand 3	C	483	484	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	417	420	first strand
Strand 2	C	430	434	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	394	395	first strand
Strand 2	G	401	411	anti-parallel
Strand 3	G	439	448	anti-parallel
Strand 4	G	451	457	anti-parallel
Strand 5	G	463	470	anti-parallel
Strand 6	G	417	421	anti-parallel
Strand 7	G	430	434	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	394	395	first strand
Strand 2	G	401	411	anti-parallel
Strand 3	G	483	484	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	394	395	first strand
Strand 2	H	401	411	anti-parallel
Strand 3	H	439	448	anti-parallel
Strand 4	H	451	457	anti-parallel
Strand 5	H	463	470	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	394	395	first strand
Strand 2	H	401	411	anti-parallel
Strand 3	H	483	484	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	417	420	first strand
Strand 2	H	430	434	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	394	395	first strand
Strand 2	B	401	411	anti-parallel
Strand 3	B	439	448	anti-parallel
Strand 4	B	451	457	anti-parallel
Strand 5	B	463	470	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	394	395	first strand
Strand 2	B	401	411	anti-parallel
Strand 3	B	483	484	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	417	420	first strand
Strand 2	B	430	434	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	394	395	first strand
Strand 2	E	401	411	anti-parallel
Strand 3	E	439	448	anti-parallel
Strand 4	E	451	457	anti-parallel
Strand 5	E	463	470	anti-parallel
Strand 6	E	417	421	anti-parallel
Strand 7	E	430	434	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	394	395	first strand
Strand 2	E	401	411	anti-parallel
Strand 3	E	483	484	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	394	395	first strand
Strand 2	F	401	411	anti-parallel
Strand 3	F	439	448	anti-parallel
Strand 4	F	451	457	anti-parallel
Strand 5	F	463	470	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	394	395	first strand
Strand 2	F	401	411	anti-parallel
Strand 3	F	483	484	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	417	420	first strand
Strand 2	F	430	434	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7AQH

Analysis of interatomic Contacts of Structural Units in PDB entry:
7AQH