Analysis of interatomic Contacts of Structural Units in PDB entry:
7AQO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7AQO entry

There are 12 chains in PDB entry 7AQO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
G
ALA 12PHE 1155
H
SER 2ASP 604
K
SER 22TYR 376
L
THR 62LEU 444
A
ALA 12PHE 1155
B
SER 2ASP 604
E
SER 22TYR 376
F
THR 62LEU 444
J
GLY 6SER 238
I
PRO 2ASP 249
C
GLY 6LYS 235
D
PRO 2LYS 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are254 helices in PDB entry 7AQO. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
G
36 51Right-handed alpha
Helix 2
AA2
G
53 72Right-handed alpha
Helix 3
AA3
G
86 101Right-handed alpha
Helix 4
AA4
G
105 115Right-handed alpha
Helix 5
AA5
G
123 132Right-handed alpha
Helix 6
AA6
G
135 143Right-handed alpha
Helix 7
AA7
G
151 166Right-handed alpha
Helix 8
AA8
G
178 194Right-handed alpha
Helix 9
AA9
G
197 200Right-handed 310
Helix 10
AB1
G
201 216Right-handed alpha
Helix 11
AB2
G
219 233Right-handed alpha
Helix 12
AB3
G
234 249Right-handed alpha
Helix 13
AB4
G
262 266Right-handed 310
Helix 14
AB5
G
271 282Right-handed alpha
Helix 15
AB6
G
289 292Right-handed 310
Helix 16
AB7
G
293 305Right-handed alpha
Helix 17
AB8
G
312 317Right-handed alpha
Helix 18
AB9
G
322 343Right-handed alpha
Helix 19
AC1
G
395 402Right-handed alpha
Helix 20
AC2
G
403 414Right-handed alpha
Helix 21
AC3
G
416 425Right-handed alpha
Helix 22
AC4
G
427 433Right-handed 310
Helix 23
AC5
G
435 456Right-handed alpha
Helix 24
AC6
G
510 514Right-handed 310
Helix 25
AC7
G
520 536Right-handed alpha
Helix 26
AC8
G
537 541Right-handed 310
Helix 27
AC9
G
542 560Right-handed alpha
Helix 28
AD1
G
565 580Right-handed alpha
Helix 29
AD2
G
581 586Right-handed alpha
Helix 30
AD3
G
591 603Right-handed alpha
Helix 31
AD4
G
606 620Right-handed alpha
Helix 32
AD5
G
625 644Right-handed alpha
Helix 33
AD6
G
650 665Right-handed alpha
Helix 34
AD7
G
665 670Right-handed alpha
Helix 35
AD8
G
670 680Right-handed alpha
Helix 36
AD9
G
682 691Right-handed alpha
Helix 37
AE1
G
692 694Right-handed 310
Helix 38
AE2
G
695 712Right-handed alpha
Helix 39
AE3
G
727 742Right-handed alpha
Helix 40
AE4
G
747 758Right-handed alpha
Helix 41
AE5
G
759 761Right-handed 310
Helix 42
AE6
G
762 776Right-handed alpha
Helix 43
AE7
G
786 793Right-handed alpha
Helix 44
AE8
G
796 807Right-handed alpha
Helix 45
AE9
G
814 827Right-handed alpha
Helix 46
AF1
G
830 847Right-handed alpha
Helix 47
AF2
G
851 877Right-handed alpha
Helix 48
AF3
G
878 885Right-handed alpha
Helix 49
AF4
G
888 895Right-handed alpha
Helix 50
AF5
G
899 917Right-handed alpha
Helix 51
AF6
G
941 951Right-handed alpha
Helix 52
AF7
G
960 970Right-handed alpha
Helix 53
AF8
G
984 993Right-handed alpha
Helix 54
AF9
G
993 1018Right-handed alpha
Helix 55
AG1
G
1025 1034Right-handed alpha
Helix 56
AG2
G
1035 1040Right-handed alpha
Helix 57
AG3
G
1042 1054Right-handed alpha
Helix 58
AG4
G
1058 1071Right-handed alpha
Helix 59
AG5
G
1074 1082Right-handed alpha
Helix 60
AG6
G
1083 1107Right-handed alpha
Helix 61
AG7
G
1113 1133Right-handed alpha
Helix 62
AG8
G
1137 1152Right-handed alpha
Helix 63
AG9
G
1153 1155Right-handed 310
Helix 64
AH1
H
3 22Right-handed alpha
Helix 65
AH2
H
25 32Right-handed alpha
Helix 66
AH3
H
35 39Right-handed 310
Helix 67
AH4
H
43 47Right-handed 310
Helix 68
AH5
H
55 59Right-handed 310
Helix 69
AH6
H
61 78Right-handed alpha
Helix 70
AH7
H
91 106Right-handed alpha
Helix 71
AH8
H
112 114Right-handed 310
Helix 72
AH9
H
115 131Right-handed alpha
Helix 73
AI1
H
133 147Right-handed alpha
Helix 74
AI2
H
147 152Right-handed alpha
Helix 75
AI3
H
173 191Right-handed alpha
Helix 76
AI4
H
196 214Right-handed alpha
Helix 77
AI5
H
251 268Right-handed alpha
Helix 78
AI6
H
271 275Right-handed 310
Helix 79
AI7
H
279 320Right-handed alpha
Helix 80
AI8
H
336 341Right-handed alpha
Helix 81
AI9
H
343 361Right-handed alpha
Helix 82
AJ1
H
378 387Right-handed alpha
Helix 83
AJ2
H
392 416Right-handed alpha
Helix 84
AJ3
H
417 430Right-handed alpha
Helix 85
AJ4
H
442 456Right-handed alpha
Helix 86
AJ5
H
459 464Right-handed alpha
Helix 87
AJ6
H
470 491Right-handed alpha
Helix 88
AJ7
H
493 497Right-handed 310
Helix 89
AJ8
H
525 532Right-handed alpha
Helix 90
AJ9
H
577 587Right-handed alpha
Helix 91
AK1
K
23 32Right-handed alpha
Helix 92
AK2
K
42 53Right-handed alpha
Helix 93
AK3
K
200 206Right-handed alpha
Helix 94
AK4
L
62 68Right-handed 310
Helix 95
AK5
L
70 79Right-handed alpha
Helix 96
AK6
L
86 97Right-handed alpha
Helix 97
AK7
L
111 124Right-handed alpha
Helix 98
AK8
L
139 154Right-handed alpha
Helix 99
AK9
L
170 180Right-handed alpha
Helix 100
AL1
L
191 201Right-handed alpha
Helix 101
AL2
L
216 223Right-handed alpha
Helix 102
AL3
L
223 236Right-handed alpha
Helix 103
AL4
L
289 291Right-handed 310
Helix 104
AL5
L
292 304Right-handed alpha
Helix 105
AL6
L
315 329Right-handed alpha
Helix 106
AL7
L
341 354Right-handed alpha
Helix 107
AL8
L
364 367Right-handed 310
Helix 108
AL9
L
386 395Right-handed alpha
Helix 109
AM1
L
412 427Right-handed alpha
Helix 110
AM2
L
439 443Right-handed 310
Helix 111
AM3
A
36 51Right-handed alpha
Helix 112
AM4
A
53 72Right-handed alpha
Helix 113
AM5
A
86 101Right-handed alpha
Helix 114
AM6
A
105 115Right-handed alpha
Helix 115
AM7
A
123 132Right-handed alpha
Helix 116
AM8
A
135 143Right-handed alpha
Helix 117
AM9
A
151 166Right-handed alpha
Helix 118
AN1
A
178 194Right-handed alpha
Helix 119
AN2
A
197 200Right-handed 310
Helix 120
AN3
A
201 216Right-handed alpha
Helix 121
AN4
A
219 233Right-handed alpha
Helix 122
AN5
A
234 249Right-handed alpha
Helix 123
AN6
A
262 266Right-handed 310
Helix 124
AN7
A
271 282Right-handed alpha
Helix 125
AN8
A
289 292Right-handed 310
Helix 126
AN9
A
293 305Right-handed alpha
Helix 127
AO1
A
312 317Right-handed alpha
Helix 128
AO2
A
322 343Right-handed alpha
Helix 129
AO3
A
395 402Right-handed alpha
Helix 130
AO4
A
403 414Right-handed alpha
Helix 131
AO5
A
416 425Right-handed alpha
Helix 132
AO6
A
427 433Right-handed 310
Helix 133
AO7
A
435 456Right-handed alpha
Helix 134
AO8
A
510 514Right-handed 310
Helix 135
AO9
A
520 536Right-handed alpha
Helix 136
AP1
A
537 541Right-handed 310
Helix 137
AP2
A
542 560Right-handed alpha
Helix 138
AP3
A
565 580Right-handed alpha
Helix 139
AP4
A
581 586Right-handed alpha
Helix 140
AP5
A
591 603Right-handed alpha
Helix 141
AP6
A
606 620Right-handed alpha
Helix 142
AP7
A
625 644Right-handed alpha
Helix 143
AP8
A
650 665Right-handed alpha
Helix 144
AP9
A
665 670Right-handed alpha
Helix 145
AQ1
A
670 680Right-handed alpha
Helix 146
AQ2
A
682 691Right-handed alpha
Helix 147
AQ3
A
692 694Right-handed 310
Helix 148
AQ4
A
695 712Right-handed alpha
Helix 149
AQ5
A
727 742Right-handed alpha
Helix 150
AQ6
A
747 758Right-handed alpha
Helix 151
AQ7
A
759 761Right-handed 310
Helix 152
AQ8
A
762 776Right-handed alpha
Helix 153
AQ9
A
786 793Right-handed alpha
Helix 154
AR1
A
796 807Right-handed alpha
Helix 155
AR2
A
814 827Right-handed alpha
Helix 156
AR3
A
830 847Right-handed alpha
Helix 157
AR4
A
851 877Right-handed alpha
Helix 158
AR5
A
878 885Right-handed alpha
Helix 159
AR6
A
888 895Right-handed alpha
Helix 160
AR7
A
899 917Right-handed alpha
Helix 161
AR8
A
941 951Right-handed alpha
Helix 162
AR9
A
960 970Right-handed alpha
Helix 163
AS1
A
984 993Right-handed alpha
Helix 164
AS2
A
993 1018Right-handed alpha
Helix 165
AS3
A
1025 1034Right-handed alpha
Helix 166
AS4
A
1035 1040Right-handed alpha
Helix 167
AS5
A
1042 1054Right-handed alpha
Helix 168
AS6
A
1058 1071Right-handed alpha
Helix 169
AS7
A
1074 1082Right-handed alpha
Helix 170
AS8
A
1083 1107Right-handed alpha
Helix 171
AS9
A
1113 1133Right-handed alpha
Helix 172
AT1
A
1137 1152Right-handed alpha
Helix 173
AT2
A
1153 1155Right-handed 310
Helix 174
AT3
B
3 22Right-handed alpha
Helix 175
AT4
B
25 32Right-handed alpha
Helix 176
AT5
B
35 39Right-handed 310
Helix 177
AT6
B
43 47Right-handed 310
Helix 178
AT7
B
55 59Right-handed 310
Helix 179
AT8
B
61 78Right-handed alpha
Helix 180
AT9
B
91 106Right-handed alpha
Helix 181
AU1
B
112 114Right-handed 310
Helix 182
AU2
B
115 131Right-handed alpha
Helix 183
AU3
B
133 147Right-handed alpha
Helix 184
AU4
B
147 152Right-handed alpha
Helix 185
AU5
B
173 191Right-handed alpha
Helix 186
AU6
B
196 214Right-handed alpha
Helix 187
AU7
B
251 268Right-handed alpha
Helix 188
AU8
B
271 275Right-handed 310
Helix 189
AU9
B
279 320Right-handed alpha
Helix 190
AV1
B
336 341Right-handed alpha
Helix 191
AV2
B
343 361Right-handed alpha
Helix 192
AV3
B
378 387Right-handed alpha
Helix 193
AV4
B
392 416Right-handed alpha
Helix 194
AV5
B
417 430Right-handed alpha
Helix 195
AV6
B
442 456Right-handed alpha
Helix 196
AV7
B
459 464Right-handed alpha
Helix 197
AV8
B
470 491Right-handed alpha
Helix 198
AV9
B
493 497Right-handed 310
Helix 199
AW1
B
525 532Right-handed alpha
Helix 200
AW2
B
577 587Right-handed alpha
Helix 201
AW3
E
23 32Right-handed alpha
Helix 202
AW4
E
42 53Right-handed alpha
Helix 203
AW5
E
200 206Right-handed alpha
Helix 204
AW6
F
62 68Right-handed 310
Helix 205
AW7
F
70 79Right-handed alpha
Helix 206
AW8
F
86 97Right-handed alpha
Helix 207
AW9
F
111 124Right-handed alpha
Helix 208
AX1
F
139 154Right-handed alpha
Helix 209
AX2
F
170 180Right-handed alpha
Helix 210
AX3
F
191 201Right-handed alpha
Helix 211
AX4
F
216 223Right-handed alpha
Helix 212
AX5
F
223 236Right-handed alpha
Helix 213
AX6
F
289 291Right-handed 310
Helix 214
AX7
F
292 304Right-handed alpha
Helix 215
AX8
F
315 329Right-handed alpha
Helix 216
AX9
F
341 354Right-handed alpha
Helix 217
AY1
F
364 367Right-handed 310
Helix 218
AY2
F
386 395Right-handed alpha
Helix 219
AY3
F
412 427Right-handed alpha
Helix 220
AY4
F
439 443Right-handed 310
Helix 221
AY5
J
8 39Right-handed alpha
Helix 222
AY6
J
45 84Right-handed alpha
Helix 223
AY7
J
86 91Right-handed alpha
Helix 224
AY8
J
92 94Right-handed 310
Helix 225
AY9
J
96 120Right-handed alpha
Helix 226
AZ1
J
150 159Right-handed alpha
Helix 227
AZ2
J
160 162Right-handed 310
Helix 228
AZ3
J
166 235Right-handed alpha
Helix 229
AZ4
J
237 238Right-handed alpha
Helix 230
AZ5
I
4 16Right-handed alpha
Helix 231
AZ6
I
21 44Right-handed alpha
Helix 232
AZ7
I
60 102Right-handed alpha
Helix 233
AZ8
I
103 105Right-handed 310
Helix 234
AZ9
I
106 143Right-handed alpha
Helix 235
BA1
I
153 160Right-handed alpha
Helix 236
BA2
I
163 169Right-handed alpha
Helix 237
BA3
I
198 249Right-handed alpha
Helix 238
BA4
C
8 39Right-handed alpha
Helix 239
BA5
C
45 84Right-handed alpha
Helix 240
BA6
C
86 91Right-handed alpha
Helix 241
BA7
C
92 94Right-handed 310
Helix 242
BA8
C
96 120Right-handed alpha
Helix 243
BA9
C
150 159Right-handed alpha
Helix 244
BB1
C
160 162Right-handed 310
Helix 245
BB2
C
166 194Right-handed alpha
Helix 246
BB3
C
194 235Right-handed alpha
Helix 247
BB4
D
4 16Right-handed alpha
Helix 248
BB5
D
21 44Right-handed alpha
Helix 249
BB6
D
60 102Right-handed alpha
Helix 250
BB7
D
103 105Right-handed 310
Helix 251
BB8
D
106 143Right-handed alpha
Helix 252
BB9
D
153 160Right-handed alpha
Helix 253
BC1
D
163 169Right-handed alpha
Helix 254
BC2
D
198 247Right-handed alpha
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There are 24 sheets in PDB entry 7AQO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
471 475first strand
Strand 2
G
478 482anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
484 485first strand
Strand 2
J
141 142parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
487 491first strand
Strand 2
G
502 506parallel
Strand 3
G
497 498anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
66 71first strand
Strand 2
K
78 82anti-parallel
Strand 3
K
87 91anti-parallel
Strand 4
K
101 102anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
117 119first strand
Strand 2
K
127 131anti-parallel
Strand 3
K
136 142anti-parallel
Strand 4
K
149 156anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
163 168first strand
Strand 2
K
174 179anti-parallel
Strand 3
K
184 188anti-parallel
Strand 4
K
194 199anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
214 217first strand
Strand 2
K
223 227anti-parallel
Strand 3
K
233 237anti-parallel
Strand 4
K
244 249anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
256 261first strand
Strand 2
K
267 272anti-parallel
Strand 3
K
277 281anti-parallel
Strand 4
K
287 291anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
298 303first strand
Strand 2
K
309 314anti-parallel
Strand 3
K
319 323anti-parallel
Strand 4
K
329 332anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
344 346first strand
Strand 2
K
353 356anti-parallel
Strand 3
K
362 363anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
102 104first strand
Strand 2
L
242 246parallel
Strand 3
L
211 215parallel
Strand 4
L
133 136parallel
Strand 5
L
187 190parallel
Strand 6
L
162 165parallel
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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
333 336first strand
Strand 2
L
359 362parallel
Strand 3
L
308 312parallel
Strand 4
L
375 380parallel
Strand 5
L
404 410parallel
Strand 6
L
281 287parallel
Strand 7
L
431 432parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
471 475first strand
Strand 2
A
478 482anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
484 485first strand
Strand 2
C
141 142parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
487 491first strand
Strand 2
A
502 506parallel
Strand 3
A
497 498anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
66 71first strand
Strand 2
E
78 82anti-parallel
Strand 3
E
87 91anti-parallel
Strand 4
E
101 102anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
117 119first strand
Strand 2
E
127 131anti-parallel
Strand 3
E
136 142anti-parallel
Strand 4
E
149 156anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
163 168first strand
Strand 2
E
174 179anti-parallel
Strand 3
E
184 188anti-parallel
Strand 4
E
194 199anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
214 217first strand
Strand 2
E
223 227anti-parallel
Strand 3
E
233 237anti-parallel
Strand 4
E
244 249anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
256 261first strand
Strand 2
E
267 272anti-parallel
Strand 3
E
277 281anti-parallel
Strand 4
E
287 291anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
298 303first strand
Strand 2
E
309 314anti-parallel
Strand 3
E
319 323anti-parallel
Strand 4
E
329 332anti-parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
344 346first strand
Strand 2
E
353 356anti-parallel
Strand 3
E
362 363anti-parallel
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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
102 104first strand
Strand 2
F
242 246parallel
Strand 3
F
211 215parallel
Strand 4
F
133 136parallel
Strand 5
F
187 190parallel
Strand 6
F
162 165parallel
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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
333 336first strand
Strand 2
F
359 362parallel
Strand 3
F
308 312parallel
Strand 4
F
375 380parallel
Strand 5
F
404 410parallel
Strand 6
F
281 287parallel
Strand 7
F
431 432parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il