Analysis of interatomic Contacts of Structural Units in PDB entry:
7AQZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7AQZ entry

There are 2 chains in PDB entry 7AQZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 27	THR 388
B	ALA 27	GLU 331

There are 32 helices in PDB entry 7AQZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	33	48	Right-handed alpha
Helix 2	AA2	A	49	83	Right-handed alpha
Helix 3	AA3	A	85	112	Right-handed alpha
Helix 4	AA4	A	112	141	Right-handed alpha
Helix 5	AA5	A	201	206	Right-handed alpha
Helix 6	AA6	A	214	217	Right-handed 310
Helix 7	AA7	A	266	278	Right-handed alpha
Helix 8	AA8	A	284	288	Right-handed 310
Helix 9	AA9	A	299	308	Right-handed alpha
Helix 10	AB1	A	315	328	Right-handed alpha
Helix 11	AB2	A	331	345	Right-handed alpha
Helix 12	AB3	A	348	352	Right-handed 310
Helix 13	AB4	A	359	363	Right-handed 310
Helix 14	AB5	A	365	388	Right-handed alpha
Helix 15	AB6	B	33	48	Right-handed alpha
Helix 16	AB7	B	49	82	Right-handed alpha
Helix 17	AB8	B	85	112	Right-handed alpha
Helix 18	AB9	B	112	141	Right-handed alpha
Helix 19	AC1	B	201	206	Right-handed alpha
Helix 20	AC2	B	214	217	Right-handed 310
Helix 21	AC3	B	266	278	Right-handed alpha
Helix 22	AC4	B	284	288	Right-handed 310
Helix 23	AC5	B	299	308	Right-handed alpha
Helix 24	AC6	B	315	328	Right-handed alpha
Helix 25	AC7	B	331	345	Right-handed alpha
Helix 26	AC8	B	348	352	Right-handed 310
Helix 27	AC9	B	359	363	Right-handed 310
Helix 28	AD1	B	365	389	Right-handed alpha
Helix 29	AD2	C	28	30	Right-handed 310
Helix 30	AD3	C	87	91	Right-handed 310
Helix 31	AD4	D	28	30	Right-handed 310
Helix 32	AD5	D	62	65	Right-handed 310

There are 12 sheets in PDB entry 7AQZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	32	first strand
Strand 2	A	207	212	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	142	144	first strand
Strand 2	A	147	148	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	162	first strand
Strand 2	A	165	166	anti-parallel
Strand 3	A	169	170	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	234	236	first strand
Strand 2	A	241	243	anti-parallel
Strand 3	A	251	252	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	30	32	first strand
Strand 2	B	207	212	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	162	first strand
Strand 2	B	165	166	anti-parallel
Strand 3	B	169	170	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	234	236	first strand
Strand 2	B	241	243	anti-parallel
Strand 3	B	251	252	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	7	first strand
Strand 2	C	18	25	anti-parallel
Strand 3	C	78	83	anti-parallel
Strand 4	C	68	73	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	13	first strand
Strand 2	C	118	123	parallel
Strand 3	C	92	100	anti-parallel
Strand 4	C	32	39	anti-parallel
Strand 5	C	46	51	anti-parallel
Strand 6	C	58	60	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	13	first strand
Strand 2	C	118	123	parallel
Strand 3	C	92	100	anti-parallel
Strand 4	C	113	114	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	6	first strand
Strand 2	D	21	25	anti-parallel
Strand 3	D	78	80	anti-parallel
Strand 4	D	71	73	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	60	first strand
Strand 2	D	47	51	anti-parallel
Strand 3	D	32	39	anti-parallel
Strand 4	D	93	100	anti-parallel
Strand 5	D	113	114	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7AQZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7AQZ