Analysis of interatomic Contacts of Structural Units in PDB entry:
7ARI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ARI entry

There are 4 chains in PDB entry 7ARI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 MET 1ARG 397
E
 PRO 4SER 412
F
 LYS 3ALA 225
D
 LYS 3LEU 223
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 7ARI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
7 14Right-handed alpha
Helix 2
AA2
C
22 55Right-handed alpha
Helix 3
AA3
C
148 155Right-handed alpha
Helix 4
AA4
C
232 236Right-handed 310
Helix 5
AA5
C
254 258Right-handed 310
Helix 6
AA6
C
260 269Right-handed alpha
Helix 7
AA7
C
273 279Right-handed alpha
Helix 8
AA8
C
279 288Right-handed alpha
Helix 9
AA9
C
293 303Right-handed alpha
Helix 10
AB1
C
306 324Right-handed alpha
Helix 11
AB2
C
325 336Right-handed alpha
Helix 12
AB3
C
361 364Right-handed 310
Helix 13
AB4
C
365 380Right-handed alpha
Helix 14
AB5
C
381 387Right-handed alpha
Helix 15
AB6
E
22 44Right-handed alpha
Helix 16
AB7
E
44 57Right-handed alpha
Helix 17
AB8
E
79 85Right-handed alpha
Helix 18
AB9
E
253 258Right-handed alpha
Helix 19
AC1
E
263 272Right-handed alpha
Helix 20
AC2
E
277 284Right-handed alpha
Helix 21
AC3
E
284 292Right-handed alpha
Helix 22
AC4
E
292 297Right-handed alpha
Helix 23
AC5
E
298 308Right-handed alpha
Helix 24
AC6
E
311 343Right-handed alpha
Helix 25
AC7
E
344 352Right-handed alpha
Helix 26
AC8
E
378 395Right-handed alpha
Helix 27
AC9
E
395 402Right-handed alpha
Helix 28
AD1
F
47 57Right-handed alpha
Helix 29
AD2
F
83 88Right-handed alpha
Helix 30
AD3
F
103 109Right-handed alpha
Helix 31
AD4
F
109 115Right-handed alpha
Helix 32
AD5
F
118 131Right-handed alpha
Helix 33
AD6
F
135 139Right-handed 310
Helix 34
AD7
F
152 160Right-handed alpha
Helix 35
AD8
F
178 195Right-handed alpha
Helix 36
AD9
D
47 57Right-handed alpha
Helix 37
AE1
D
79 88Right-handed alpha
Helix 38
AE2
D
103 109Right-handed alpha
Helix 39
AE3
D
109 115Right-handed alpha
Helix 40
AE4
D
118 131Right-handed alpha
Helix 41
AE5
D
147 158Right-handed alpha
Helix 42
AE6
D
178 194Right-handed alpha
Helix 43
AE7
D
218 222Right-handed 310
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There are 10 sheets in PDB entry 7ARI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
66 67first strand
Strand 2
C
221 224anti-parallel
Strand 3
C
95 96anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
180 183first strand
Strand 2
C
163 166anti-parallel
Strand 3
C
100 104anti-parallel
Strand 4
C
109 117anti-parallel
Strand 5
C
200 204parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
143 147first strand
Strand 2
C
185 190parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
115 116first strand
Strand 2
E
204 205parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
147 150first strand
Strand 2
E
187 192parallel
Strand 3
E
165 166anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
31 32first strand
Strand 2
F
6 9anti-parallel
Strand 3
F
65 68anti-parallel
Strand 4
F
71 72anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
38 41first strand
Strand 2
F
198 203parallel
Strand 3
F
166 169parallel
Strand 4
F
90 92parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
217 218first strand
Strand 2
F
223 224anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 7first strand
Strand 2
D
31 32anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
39 41first strand
Strand 2
D
198 203parallel
Strand 3
D
166 169parallel
Strand 4
D
89 92parallel
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