Analysis of interatomic Contacts of Structural Units in PDB entry:
7ARM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ARM entry

There are 6 chains in PDB entry 7ARM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 TYR 2ARG 397
E
 PRO 4SER 412
F
 LYS 3LEU 223
D
 LYS 3GLU 226
V
 CYS 1LEU 10
A
 ASP 1LYS 182
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 7ARM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
5 10Right-handed alpha
Helix 2
AA2
C
20 26Right-handed alpha
Helix 3
AA3
C
28 55Right-handed alpha
Helix 4
AA4
C
133 137Right-handed 310
Helix 5
AA5
C
147 155Right-handed alpha
Helix 6
AA6
C
195 198Right-handed 310
Helix 7
AA7
C
248 252Right-handed 310
Helix 8
AA8
C
253 271Right-handed alpha
Helix 9
AA9
C
272 293Right-handed alpha
Helix 10
AB1
C
293 302Right-handed alpha
Helix 11
AB2
C
306 337Right-handed alpha
Helix 12
AB3
C
344 348Right-handed 310
Helix 13
AB4
C
361 379Right-handed alpha
Helix 14
AB5
C
380 389Right-handed alpha
Helix 15
AB6
E
6 11Right-handed alpha
Helix 16
AB7
E
22 59Right-handed alpha
Helix 17
AB8
E
77 85Right-handed alpha
Helix 18
AB9
E
122 126Right-handed 310
Helix 19
AC1
E
129 133Right-handed 310
Helix 20
AC2
E
152 159Right-handed alpha
Helix 21
AC3
E
208 212Right-handed alpha
Helix 22
AC4
E
235 244Right-handed alpha
Helix 23
AC5
E
258 263Right-handed alpha
Helix 24
AC6
E
267 284Right-handed alpha
Helix 25
AC7
E
284 298Right-handed alpha
Helix 26
AC8
E
298 308Right-handed alpha
Helix 27
AC9
E
311 336Right-handed alpha
Helix 28
AD1
E
338 343Right-handed alpha
Helix 29
AD2
E
345 353Right-handed alpha
Helix 30
AD3
E
376 402Right-handed alpha
Helix 31
AD4
F
49 55Right-handed alpha
Helix 32
AD5
F
103 108Right-handed alpha
Helix 33
AD6
F
109 115Right-handed alpha
Helix 34
AD7
F
118 129Right-handed alpha
Helix 35
AD8
F
129 134Right-handed alpha
Helix 36
AD9
F
147 160Right-handed alpha
Helix 37
AE1
F
178 191Right-handed alpha
Helix 38
AE2
D
50 55Right-handed alpha
Helix 39
AE3
D
103 108Right-handed alpha
Helix 40
AE4
D
109 115Right-handed alpha
Helix 41
AE5
D
118 122Right-handed 310
Helix 42
AE6
D
124 132Right-handed alpha
Helix 43
AE7
D
142 146Right-handed 310
Helix 44
AE8
D
147 158Right-handed alpha
Helix 45
AE9
D
177 190Right-handed alpha
Helix 46
AF1
D
191 193Right-handed 310
Helix 47
AF2
D
205 209Right-handed 310
Helix 48
AF3
A
1 5Right-handed 310
Helix 49
AF4
A
88 96Right-handed alpha
Helix 50
AF5
A
97 101Right-handed 310
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There are 14 sheets in PDB entry 7ARM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
67 69first strand
Strand 2
C
245 247anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
90 96first strand
Strand 2
C
221 226anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
98 104first strand
Strand 2
C
109 117anti-parallel
Strand 3
C
200 204parallel
Strand 4
C
143 145anti-parallel
Strand 5
C
180 186parallel
Strand 6
C
161 166anti-parallel
Strand 7
C
98 104anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
67 69first strand
Strand 2
E
250 252anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
91 96first strand
Strand 2
E
224 228anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
98 104first strand
Strand 2
E
111 118anti-parallel
Strand 3
E
204 207parallel
Strand 4
E
147 150anti-parallel
Strand 5
E
186 192parallel
Strand 6
E
165 167anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
14 16first strand
Strand 2
F
21 23anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
38 41first strand
Strand 2
F
200 203parallel
Strand 3
F
168 170parallel
Strand 4
F
91 92parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 13first strand
Strand 2
D
25 26anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
90 91first strand
Strand 2
D
167 168parallel
Strand 3
D
199 200parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 50first strand
Strand 2
A
38 41anti-parallel
Strand 3
A
17 20anti-parallel
Strand 4
A
154 155anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 35first strand
Strand 2
A
22 25anti-parallel
Strand 3
A
148 151anti-parallel
Strand 4
A
142 144anti-parallel
Strand 5
A
124 127anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 70first strand
Strand 2
A
75 79anti-parallel
Strand 3
A
176 177parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
137 139anti-parallel
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