Analysis of interatomic Contacts of Structural Units in PDB entry:
7AUD

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7AUD entry

There are 3 chains in PDB entry 7AUD (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 640	PRO 1291
B	ASN 638	PRO 1291
C	ASN 638	LEU 908

There are162 helices in PDB entry 7AUD. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	651	662	Right-handed alpha
Helix 2	AA2	A	671	681	Right-handed alpha
Helix 3	AA3	A	694	706	Right-handed alpha
Helix 4	AA4	A	716	730	Right-handed alpha
Helix 5	AA5	A	742	755	Right-handed alpha
Helix 6	AA6	A	766	771	Right-handed alpha
Helix 7	AA7	A	773	786	Right-handed alpha
Helix 8	AA8	A	797	804	Right-handed alpha
Helix 9	AA9	A	809	814	Right-handed alpha
Helix 10	AB1	A	815	821	Right-handed alpha
Helix 11	AB2	A	834	845	Right-handed alpha
Helix 12	AB3	A	873	886	Right-handed alpha
Helix 13	AB4	A	897	911	Right-handed alpha
Helix 14	AB5	A	923	936	Right-handed alpha
Helix 15	AB6	A	969	979	Right-handed alpha
Helix 16	AB7	A	994	1007	Right-handed alpha
Helix 17	AB8	A	1012	1032	Right-handed alpha
Helix 18	AB9	A	1036	1045	Right-handed alpha
Helix 19	AC1	A	1053	1058	Right-handed alpha
Helix 20	AC2	A	1059	1062	Right-handed 310
Helix 21	AC3	A	1064	1068	Right-handed 310
Helix 22	AC4	A	1203	1234	Right-handed alpha
Helix 23	AC5	A	1236	1240	Right-handed 310
Helix 24	AC6	A	1242	1253	Right-handed alpha
Helix 25	AC7	A	1256	1261	Right-handed alpha
Helix 26	AC8	A	1267	1284	Right-handed alpha
Helix 27	AC9	A	1285	1289	Right-handed 310
Helix 28	AD1	B	639	645	Right-handed alpha
Helix 29	AD2	B	651	662	Right-handed alpha
Helix 30	AD3	B	671	681	Right-handed alpha
Helix 31	AD4	B	694	706	Right-handed alpha
Helix 32	AD5	B	716	730	Right-handed alpha
Helix 33	AD6	B	742	755	Right-handed alpha
Helix 34	AD7	B	766	771	Right-handed alpha
Helix 35	AD8	B	773	786	Right-handed alpha
Helix 36	AD9	B	797	804	Right-handed alpha
Helix 37	AE1	B	809	814	Right-handed alpha
Helix 38	AE2	B	815	821	Right-handed alpha
Helix 39	AE3	B	834	845	Right-handed alpha
Helix 40	AE4	B	873	886	Right-handed alpha
Helix 41	AE5	B	897	911	Right-handed alpha
Helix 42	AE6	B	923	937	Right-handed alpha
Helix 43	AE7	B	969	978	Right-handed alpha
Helix 44	AE8	B	994	1007	Right-handed alpha
Helix 45	AE9	B	1012	1032	Right-handed alpha
Helix 46	AF1	B	1036	1045	Right-handed alpha
Helix 47	AF2	B	1053	1058	Right-handed alpha
Helix 48	AF3	B	1059	1062	Right-handed 310
Helix 49	AF4	B	1210	1234	Right-handed alpha
Helix 50	AF5	B	1236	1240	Right-handed 310
Helix 51	AF6	B	1242	1253	Right-handed alpha
Helix 52	AF7	B	1256	1261	Right-handed alpha
Helix 53	AF8	B	1267	1286	Right-handed alpha
Helix 54	AF9	B	1287	1289	Right-handed 310
Helix 55	AG1	C	639	645	Right-handed alpha
Helix 56	AG2	C	651	662	Right-handed alpha
Helix 57	AG3	C	671	681	Right-handed alpha
Helix 58	AG4	C	694	706	Right-handed alpha
Helix 59	AG5	C	716	730	Right-handed alpha
Helix 60	AG6	C	742	755	Right-handed alpha
Helix 61	AG7	C	766	771	Right-handed alpha
Helix 62	AG8	C	773	786	Right-handed alpha
Helix 63	AG9	C	797	804	Right-handed alpha
Helix 64	AH1	C	809	814	Right-handed alpha
Helix 65	AH2	C	815	821	Right-handed alpha
Helix 66	AH3	C	834	845	Right-handed alpha
Helix 67	AH4	C	873	886	Right-handed alpha
Helix 68	AH5	C	897	911	Right-handed alpha
Helix 69	AH6	C	923	936	Right-handed alpha
Helix 70	AH7	C	969	978	Right-handed alpha
Helix 71	AH8	C	994	1007	Right-handed alpha
Helix 72	AH9	C	1012	1031	Right-handed alpha
Helix 73	AI1	C	1036	1045	Right-handed alpha
Helix 74	AI2	C	1053	1058	Right-handed alpha
Helix 75	AI3	C	1059	1062	Right-handed 310
Helix 76	AI4	C	1210	1234	Right-handed alpha
Helix 77	AI5	C	1236	1240	Right-handed 310
Helix 78	AI6	C	1242	1253	Right-handed alpha
Helix 79	AI7	C	1256	1262	Right-handed alpha
Helix 80	AI8	C	1267	1283	Right-handed alpha
Helix 81	AI9	C	1284	1289	Right-handed 310
Helix 82	AJ1	D	641	645	Right-handed 310
Helix 83	AJ2	D	651	662	Right-handed alpha
Helix 84	AJ3	D	671	681	Right-handed alpha
Helix 85	AJ4	D	694	706	Right-handed alpha
Helix 86	AJ5	D	716	730	Right-handed alpha
Helix 87	AJ6	D	742	755	Right-handed alpha
Helix 88	AJ7	D	766	771	Right-handed alpha
Helix 89	AJ8	D	773	786	Right-handed alpha
Helix 90	AJ9	D	797	804	Right-handed alpha
Helix 91	AK1	D	809	814	Right-handed alpha
Helix 92	AK2	D	816	821	Right-handed alpha
Helix 93	AK3	D	834	845	Right-handed alpha
Helix 94	AK4	D	873	886	Right-handed alpha
Helix 95	AK5	D	897	911	Right-handed alpha
Helix 96	AK6	D	923	937	Right-handed alpha
Helix 97	AK7	D	969	978	Right-handed alpha
Helix 98	AK8	D	994	1007	Right-handed alpha
Helix 99	AK9	D	1012	1032	Right-handed alpha
Helix 100	AL1	D	1036	1045	Right-handed alpha
Helix 101	AL2	D	1053	1058	Right-handed alpha
Helix 102	AL3	D	1059	1062	Right-handed 310
Helix 103	AL4	D	1210	1234	Right-handed alpha
Helix 104	AL5	D	1236	1240	Right-handed 310
Helix 105	AL6	D	1242	1253	Right-handed alpha
Helix 106	AL7	D	1256	1261	Right-handed alpha
Helix 107	AL8	D	1267	1283	Right-handed alpha
Helix 108	AL9	D	1284	1289	Right-handed 310
Helix 109	AM1	E	639	644	Right-handed alpha
Helix 110	AM2	E	651	662	Right-handed alpha
Helix 111	AM3	E	671	681	Right-handed alpha
Helix 112	AM4	E	694	706	Right-handed alpha
Helix 113	AM5	E	716	730	Right-handed alpha
Helix 114	AM6	E	742	755	Right-handed alpha
Helix 115	AM7	E	766	771	Right-handed alpha
Helix 116	AM8	E	773	786	Right-handed alpha
Helix 117	AM9	E	797	804	Right-handed alpha
Helix 118	AN1	E	809	814	Right-handed alpha
Helix 119	AN2	E	814	821	Right-handed alpha
Helix 120	AN3	E	834	845	Right-handed alpha
Helix 121	AN4	E	873	886	Right-handed alpha
Helix 122	AN5	E	897	911	Right-handed alpha
Helix 123	AN6	E	923	937	Right-handed alpha
Helix 124	AN7	E	969	979	Right-handed alpha
Helix 125	AN8	E	994	1007	Right-handed alpha
Helix 126	AN9	E	1012	1032	Right-handed alpha
Helix 127	AO1	E	1036	1045	Right-handed alpha
Helix 128	AO2	E	1053	1058	Right-handed alpha
Helix 129	AO3	E	1059	1062	Right-handed 310
Helix 130	AO4	E	1210	1234	Right-handed alpha
Helix 131	AO5	E	1236	1240	Right-handed 310
Helix 132	AO6	E	1242	1253	Right-handed alpha
Helix 133	AO7	E	1256	1262	Right-handed alpha
Helix 134	AO8	E	1267	1283	Right-handed alpha
Helix 135	AO9	E	1284	1289	Right-handed 310
Helix 136	AP1	F	641	645	Right-handed alpha
Helix 137	AP2	F	651	662	Right-handed alpha
Helix 138	AP3	F	671	681	Right-handed alpha
Helix 139	AP4	F	694	706	Right-handed alpha
Helix 140	AP5	F	716	730	Right-handed alpha
Helix 141	AP6	F	742	755	Right-handed alpha
Helix 142	AP7	F	766	771	Right-handed alpha
Helix 143	AP8	F	773	786	Right-handed alpha
Helix 144	AP9	F	797	804	Right-handed alpha
Helix 145	AQ1	F	809	814	Right-handed alpha
Helix 146	AQ2	F	815	821	Right-handed alpha
Helix 147	AQ3	F	834	845	Right-handed alpha
Helix 148	AQ4	F	873	886	Right-handed alpha
Helix 149	AQ5	F	897	911	Right-handed alpha
Helix 150	AQ6	F	923	936	Right-handed alpha
Helix 151	AQ7	F	969	978	Right-handed alpha
Helix 152	AQ8	F	994	1007	Right-handed alpha
Helix 153	AQ9	F	1012	1032	Right-handed alpha
Helix 154	AR1	F	1036	1045	Right-handed alpha
Helix 155	AR2	F	1053	1058	Right-handed alpha
Helix 156	AR3	F	1059	1062	Right-handed 310
Helix 157	AR4	F	1203	1234	Right-handed alpha
Helix 158	AR5	F	1236	1240	Right-handed 310
Helix 159	AR6	F	1242	1253	Right-handed alpha
Helix 160	AR7	F	1256	1261	Right-handed alpha
Helix 161	AR8	F	1267	1280	Right-handed alpha
Helix 162	AR9	F	1281	1286	Right-handed 310

There are 12 sheets in PDB entry 7AUD. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	734	736	first strand
Strand 2	A	762	765	parallel
Strand 3	A	709	713	parallel
Strand 4	A	789	795	parallel
Strand 5	A	826	830	parallel
Strand 6	A	685	688	parallel
Strand 7	A	851	853	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	862	868	first strand
Strand 2	A	987	993	parallel
Strand 3	A	958	963	parallel
Strand 4	A	890	894	parallel
Strand 5	A	942	945	parallel
Strand 6	A	915	918	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	734	736	first strand
Strand 2	B	762	765	parallel
Strand 3	B	709	713	parallel
Strand 4	B	789	795	parallel
Strand 5	B	826	830	parallel
Strand 6	B	685	688	parallel
Strand 7	B	851	853	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	862	868	first strand
Strand 2	B	987	993	parallel
Strand 3	B	960	963	parallel
Strand 4	B	891	894	parallel
Strand 5	B	942	945	parallel
Strand 6	B	915	918	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	734	736	first strand
Strand 2	C	762	765	parallel
Strand 3	C	709	713	parallel
Strand 4	C	789	795	parallel
Strand 5	C	826	830	parallel
Strand 6	C	685	688	parallel
Strand 7	C	851	853	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	862	868	first strand
Strand 2	C	987	993	parallel
Strand 3	C	958	963	parallel
Strand 4	C	890	894	parallel
Strand 5	C	942	945	parallel
Strand 6	C	915	918	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	734	736	first strand
Strand 2	D	762	765	parallel
Strand 3	D	709	713	parallel
Strand 4	D	789	795	parallel
Strand 5	D	826	830	parallel
Strand 6	D	685	688	parallel
Strand 7	D	851	853	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	862	868	first strand
Strand 2	D	987	993	parallel
Strand 3	D	958	963	parallel
Strand 4	D	890	894	parallel
Strand 5	D	942	945	parallel
Strand 6	D	915	918	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	734	736	first strand
Strand 2	E	762	765	parallel
Strand 3	E	709	713	parallel
Strand 4	E	789	795	parallel
Strand 5	E	826	830	parallel
Strand 6	E	685	688	parallel
Strand 7	E	851	854	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	862	868	first strand
Strand 2	E	987	993	parallel
Strand 3	E	960	963	parallel
Strand 4	E	891	894	parallel
Strand 5	E	942	945	parallel
Strand 6	E	915	918	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	734	736	first strand
Strand 2	F	762	765	parallel
Strand 3	F	709	713	parallel
Strand 4	F	789	795	parallel
Strand 5	F	826	830	parallel
Strand 6	F	685	688	parallel
Strand 7	F	851	853	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	862	868	first strand
Strand 2	F	987	993	parallel
Strand 3	F	958	963	parallel
Strand 4	F	890	894	parallel
Strand 5	F	942	945	parallel
Strand 6	F	915	918	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7AUD

Analysis of interatomic Contacts of Structural Units in PDB entry:
7AUD