Analysis of interatomic Contacts of Structural Units in PDB entry:
7AUE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7AUE entry

There are 8 chains in PDB entry 7AUE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
R	CYS 40	ILE 317
A	CYS 3	LEU 373
B	GLU 20	ASN 357
G	ALA 7	GLU 63
S	VAL 2	LEU 235
C	ARG 2	CYS 3
C	HIS 5	HIS 5
C	ARG 7	TRP 8

There are 31 helices in PDB entry 7AUE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	R	47	51	Right-handed 310
Helix 2	AA2	R	56	72	Right-handed alpha
Helix 3	AA3	R	73	76	Right-handed 310
Helix 4	AA4	R	77	96	Right-handed alpha
Helix 5	AA5	R	97	108	Right-handed alpha
Helix 6	AA6	R	117	122	Right-handed 310
Helix 7	AA7	R	124	153	Right-handed alpha
Helix 8	AA8	R	162	186	Right-handed alpha
Helix 9	AA9	R	193	203	Right-handed alpha
Helix 10	AB1	R	204	215	Right-handed alpha
Helix 11	AB2	R	220	225	Right-handed alpha
Helix 12	AB3	R	242	251	Right-handed alpha
Helix 13	AB4	R	251	271	Right-handed alpha
Helix 14	AB5	R	274	281	Right-handed alpha
Helix 15	AB6	R	282	287	Right-handed 310
Helix 16	AB7	R	288	302	Right-handed alpha
Helix 17	AB8	R	306	315	Right-handed alpha
Helix 18	AB9	A	6	28	Right-handed alpha
Helix 19	AC1	A	45	55	Right-handed alpha
Helix 20	AC2	A	213	217	Right-handed 310
Helix 21	AC3	A	245	257	Right-handed alpha
Helix 22	AC4	A	258	262	Right-handed 310
Helix 23	AC5	A	272	281	Right-handed alpha
Helix 24	AC6	A	286	291	Right-handed alpha
Helix 25	AC7	A	310	329	Right-handed alpha
Helix 26	AC8	A	351	370	Right-handed alpha
Helix 27	AC9	B	27	37	Right-handed alpha
Helix 28	AD1	B	46	51	Right-handed alpha
Helix 29	AD2	G	10	20	Right-handed alpha
Helix 30	AD3	G	29	44	Right-handed alpha
Helix 31	AD4	S	28	32	Right-handed 310

There are 13 sheets in PDB entry 7AUE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	193	first strand
Strand 2	A	196	203	anti-parallel
Strand 3	A	34	38	parallel
Strand 4	A	222	228	parallel
Strand 5	A	265	271	parallel
Strand 6	A	338	339	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	69	first strand
Strand 2	B	352	355	anti-parallel
Strand 3	B	344	348	anti-parallel
Strand 4	B	332	337	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	80	first strand
Strand 2	B	86	91	anti-parallel
Strand 3	B	95	100	anti-parallel
Strand 4	B	105	111	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	120	122	first strand
Strand 2	B	128	131	anti-parallel
Strand 3	B	138	142	anti-parallel
Strand 4	B	151	156	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	168	first strand
Strand 2	B	173	178	anti-parallel
Strand 3	B	183	187	anti-parallel
Strand 4	B	192	197	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	204	209	first strand
Strand 2	B	215	220	anti-parallel
Strand 3	B	225	229	anti-parallel
Strand 4	B	235	239	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	246	251	first strand
Strand 2	B	257	262	anti-parallel
Strand 3	B	267	271	anti-parallel
Strand 4	B	276	281	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	290	295	first strand
Strand 2	B	301	306	anti-parallel
Strand 3	B	311	315	anti-parallel
Strand 4	B	320	324	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	3	7	first strand
Strand 2	S	17	25	anti-parallel
Strand 3	S	78	84	anti-parallel
Strand 4	S	68	73	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	58	60	first strand
Strand 2	S	45	51	anti-parallel
Strand 3	S	33	39	anti-parallel
Strand 4	S	92	99	anti-parallel
Strand 5	S	110	111	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	58	60	first strand
Strand 2	S	45	51	anti-parallel
Strand 3	S	33	39	anti-parallel
Strand 4	S	92	99	anti-parallel
Strand 5	S	115	117	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	128	129	first strand
Strand 2	S	143	149	anti-parallel
Strand 3	S	199	204	anti-parallel
Strand 4	S	191	196	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	134	136	first strand
Strand 2	S	231	234	parallel
Strand 3	S	214	219	anti-parallel
Strand 4	S	162	167	anti-parallel
Strand 5	S	174	178	anti-parallel
Strand 6	S	182	183	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7AUE

Analysis of interatomic Contacts of Structural Units in PDB entry:
7AUE