Analysis of interatomic Contacts of Structural Units in PDB entry:
7AWA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7AWA entry

There is 1 chain in PDB entry 7AWA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 345SER 672
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7AWA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
359 362Right-handed 310
Helix 2
AA2
A
365 382Right-handed alpha
Helix 3
AA3
A
437 440Right-handed 310
Helix 4
AA4
A
447 457Right-handed alpha
Helix 5
AA5
A
465 478Right-handed alpha
Helix 6
AA6
A
479 484Right-handed 310
Helix 7
AA7
A
485 497Right-handed alpha
Helix 8
AA8
A
500 508Right-handed alpha
Helix 9
AA9
A
512 526Right-handed alpha
Helix 10
AB1
A
532 544Right-handed alpha
Helix 11
AB2
A
545 547Right-handed 310
Helix 12
AB3
A
549 560Right-handed alpha
Helix 13
AB4
A
561 570Right-handed alpha
Helix 14
AB5
A
571 574Right-handed 310
Helix 15
AB6
A
582 594Right-handed alpha
Helix 16
AB7
A
605 621Right-handed alpha
Helix 17
AB8
A
634 643Right-handed alpha
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There are 3 sheets in PDB entry 7AWA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 392first strand
Strand 2
A
353 357parallel
Strand 3
A
399 404anti-parallel
Strand 4
A
408 413anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
421 423first strand
Strand 2
A
442 445anti-parallel
Strand 3
A
432 435anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
576 578first strand
Strand 2
A
663 665parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il