Analysis of interatomic Contacts of Structural Units in PDB entry:
7AWQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7AWQ entry

There is 1 chain in PDB entry 7AWQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 31GLU 488
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 7AWQ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
31 36Right-handed alpha
Helix 2
AA2
A
41 48Right-handed alpha
Helix 3
AA3
A
48 68Right-handed alpha
Helix 4
AA4
A
74 82Right-handed alpha
Helix 5
AA5
A
82 111Right-handed alpha
Helix 6
AA6
A
112 145Right-handed alpha
Helix 7
AA7
A
171 184Right-handed alpha
Helix 8
AA8
A
187 192Right-handed alpha
Helix 9
AA9
A
222 241Right-handed alpha
Helix 10
AB1
A
244 266Right-handed alpha
Helix 11
AB2
A
268 279Right-handed alpha
Helix 12
AB3
A
294 311Right-handed alpha
Helix 13
AB4
A
311 321Right-handed alpha
Helix 14
AB5
A
324 332Right-handed alpha
Helix 15
AB6
A
332 343Right-handed alpha
Helix 16
AB7
A
344 359Right-handed alpha
Helix 17
AB8
A
363 377Right-handed alpha
Helix 18
AB9
A
379 398Right-handed alpha
Helix 19
AC1
A
405 420Right-handed alpha
Helix 20
AC2
A
425 430Right-handed alpha
Helix 21
AC3
A
430 437Right-handed alpha
Helix 22
AC4
A
441 443Right-handed 310
Helix 23
AC5
A
444 478Right-handed alpha
Helix 24
AC6
A
478 486Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 7AWQ.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
194 196first strand
Strand 2
A
217 219anti-parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il