Analysis of interatomic Contacts of Structural Units in PDB entry:
7AWT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7AWT entry

There are 5 chains in PDB entry 7AWT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ASN 52	ILE 220
D	GLU 8	ARG 596
E	ALA 11	LYS 166
F	ASN 3	LEU 441
G	ALA 2	CYS 34

There are 93 helices in PDB entry 7AWT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	62	68	Right-handed alpha
Helix 2	AA2	B	70	74	Right-handed 310
Helix 3	AA3	B	89	93	Right-handed 310
Helix 4	AA4	B	106	117	Right-handed alpha
Helix 5	AA5	B	126	132	Right-handed alpha
Helix 6	AA6	B	144	148	Right-handed 310
Helix 7	AA7	B	161	177	Right-handed alpha
Helix 8	AA8	B	204	210	Right-handed alpha
Helix 9	AA9	D	19	30	Right-handed alpha
Helix 10	AB1	D	52	62	Right-handed alpha
Helix 11	AB2	D	130	141	Right-handed alpha
Helix 12	AB3	D	177	191	Right-handed alpha
Helix 13	AB4	D	196	201	Right-handed alpha
Helix 14	AB5	D	254	258	Right-handed 310
Helix 15	AB6	D	264	272	Right-handed alpha
Helix 16	AB7	D	279	292	Right-handed alpha
Helix 17	AB8	D	296	326	Right-handed alpha
Helix 18	AB9	D	333	351	Right-handed alpha
Helix 19	AC1	D	371	396	Right-handed alpha
Helix 20	AC2	D	397	404	Right-handed alpha
Helix 21	AC3	D	411	418	Right-handed alpha
Helix 22	AC4	D	433	438	Right-handed alpha
Helix 23	AC5	D	442	446	Right-handed 310
Helix 24	AC6	D	458	483	Right-handed alpha
Helix 25	AC7	D	500	505	Right-handed alpha
Helix 26	AC8	D	507	520	Right-handed alpha
Helix 27	AC9	D	560	567	Right-handed alpha
Helix 28	AD1	D	567	572	Right-handed alpha
Helix 29	AD2	D	576	587	Right-handed alpha
Helix 30	AD3	D	590	596	Right-handed alpha
Helix 31	AD4	E	15	26	Right-handed alpha
Helix 32	AD5	E	31	34	Right-handed 310
Helix 33	AD6	E	35	48	Right-handed alpha
Helix 34	AD7	E	51	63	Right-handed alpha
Helix 35	AD8	E	65	76	Right-handed alpha
Helix 36	AD9	E	94	101	Right-handed alpha
Helix 37	AE1	E	101	113	Right-handed alpha
Helix 38	AE2	E	157	163	Right-handed alpha
Helix 39	AE3	F	13	17	Right-handed 310
Helix 40	AE4	F	25	32	Right-handed alpha
Helix 41	AE5	F	35	45	Right-handed alpha
Helix 42	AE6	F	49	58	Right-handed alpha
Helix 43	AE7	F	68	75	Right-handed alpha
Helix 44	AE8	F	99	108	Right-handed alpha
Helix 45	AE9	F	108	123	Right-handed alpha
Helix 46	AF1	F	136	153	Right-handed alpha
Helix 47	AF2	F	177	181	Right-handed 310
Helix 48	AF3	F	182	191	Right-handed alpha
Helix 49	AF4	F	219	232	Right-handed alpha
Helix 50	AF5	F	232	238	Right-handed alpha
Helix 51	AF6	F	269	275	Right-handed alpha
Helix 52	AF7	F	302	307	Right-handed 310
Helix 53	AF8	F	310	317	Right-handed alpha
Helix 54	AF9	F	334	349	Right-handed alpha
Helix 55	AG1	F	354	374	Right-handed alpha
Helix 56	AG2	F	380	391	Right-handed alpha
Helix 57	AG3	F	399	405	Right-handed alpha
Helix 58	AG4	F	405	421	Right-handed alpha
Helix 59	AG5	G	18	27	Right-handed alpha
Helix 60	AG6	G	67	69	Right-handed 310
Helix 61	AG7	G	81	98	Right-handed alpha
Helix 62	AG8	G	112	121	Right-handed alpha
Helix 63	AG9	G	147	151	Right-handed 310
Helix 64	AH1	G	155	164	Right-handed alpha
Helix 65	AH2	G	196	201	Right-handed alpha
Helix 66	AH3	G	208	214	Right-handed alpha
Helix 67	AH4	G	217	221	Right-handed 310
Helix 68	AH5	G	264	269	Right-handed alpha
Helix 69	AH6	G	270	274	Right-handed 310
Helix 70	AH7	G	294	307	Right-handed alpha
Helix 71	AH8	G	321	333	Right-handed alpha
Helix 72	AH9	G	342	358	Right-handed alpha
Helix 73	AI1	G	367	372	Right-handed 310
Helix 74	AI2	G	386	397	Right-handed alpha
Helix 75	AI3	G	398	407	Right-handed alpha
Helix 76	AI4	G	414	423	Right-handed alpha
Helix 77	AI5	G	452	467	Right-handed alpha
Helix 78	AI6	G	476	491	Right-handed alpha
Helix 79	AI7	G	506	524	Right-handed alpha
Helix 80	AI8	G	537	545	Right-handed alpha
Helix 81	AI9	G	548	558	Right-handed alpha
Helix 82	AJ1	G	576	586	Right-handed alpha
Helix 83	AJ2	G	599	603	Right-handed 310
Helix 84	AJ3	G	647	661	Right-handed alpha
Helix 85	AJ4	G	668	680	Right-handed alpha
Helix 86	AJ5	G	681	684	Right-handed 310
Helix 87	AJ6	G	761	767	Right-handed 310
Helix 88	AJ7	G	824	828	Right-handed 310
Helix 89	AJ8	G	830	835	Right-handed alpha
Helix 90	AJ9	G	843	848	Right-handed alpha
Helix 91	AK1	I	64	70	Right-handed alpha
Helix 92	AK2	I	103	109	Right-handed alpha
Helix 93	AK3	I	149	153	Right-handed 310

There are 22 sheets in PDB entry 7AWT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	59	first strand
Strand 2	B	95	98	parallel
Strand 3	B	122	125	parallel
Strand 4	B	153	154	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	37	first strand
Strand 2	D	45	48	anti-parallel
Strand 3	D	105	113	parallel
Strand 4	D	92	100	anti-parallel
Strand 5	D	69	77	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	119	121	first strand
Strand 2	D	144	146	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	215	216	first strand
Strand 2	D	229	233	anti-parallel
Strand 3	D	238	242	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	359	360	first strand
Strand 2	D	363	364	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	527	535	first strand
Strand 2	D	538	546	anti-parallel
Strand 3	D	554	558	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	128	131	first strand
Strand 2	E	89	92	parallel
Strand 3	E	143	144	anti-parallel
Strand 4	E	149	150	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	168	173	first strand
Strand 2	F	127	132	parallel
Strand 3	F	86	90	parallel
Strand 4	F	214	218	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	260	264	first strand
Strand 2	F	248	254	anti-parallel
Strand 3	F	325	330	parallel
Strand 4	F	287	291	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	9	12	first strand
Strand 2	G	3	6	anti-parallel
Strand 3	G	76	78	parallel
Strand 4	G	49	53	anti-parallel
Strand 5	G	62	65	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	171	173	first strand
Strand 2	G	180	182	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	226	227	first strand
Strand 2	G	236	242	anti-parallel
Strand 3	G	245	251	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	289	292	first strand
Strand 2	G	283	286	anti-parallel
Strand 3	G	606	607	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	337	339	first strand
Strand 2	G	313	316	parallel
Strand 3	G	564	567	parallel
Strand 4	G	591	593	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	445	448	first strand
Strand 2	G	429	433	parallel
Strand 3	G	375	378	parallel
Strand 4	G	497	501	parallel
Strand 5	G	528	532	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	618	621	first strand
Strand 2	G	626	630	anti-parallel
Strand 3	G	783	784	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	702	703	first strand
Strand 2	G	734	735	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	881	886	first strand
Strand 2	G	810	816	parallel
Strand 3	G	899	900	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	840	842	first strand
Strand 2	G	871	873	parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	866	869	first strand
Strand 2	G	858	861	anti-parallel
Strand 3	G	902	905	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	47	50	first strand
Strand 2	I	114	117	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	75	81	first strand
Strand 2	I	87	95	anti-parallel
Strand 3	I	131	132	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7AWT

Analysis of interatomic Contacts of Structural Units in PDB entry:
7AWT