Analysis of interatomic Contacts of Structural Units in PDB entry:
7AYX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7AYX entry

There are 2 chains in PDB entry 7AYX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2ARG 409
B
 LEU 1ARG 409
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 7AYX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 8Right-handed alpha
Helix 2
AA2
A
11 30Right-handed alpha
Helix 3
AA3
A
45 55Right-handed alpha
Helix 4
AA4
A
68 72Right-handed 310
Helix 5
AA5
A
88 101Right-handed alpha
Helix 6
AA6
A
102 108Right-handed alpha
Helix 7
AA7
A
109 129Right-handed alpha
Helix 8
AA8
A
136 140Right-handed alpha
Helix 9
AA9
A
140 154Right-handed alpha
Helix 10
AB1
A
156 158Right-handed 310
Helix 11
AB2
A
159 171Right-handed alpha
Helix 12
AB3
A
187 211Right-handed alpha
Helix 13
AB4
A
215 223Right-handed alpha
Helix 14
AB5
A
231 263Right-handed alpha
Helix 15
AB6
A
264 274Right-handed alpha
Helix 16
AB7
A
277 289Right-handed alpha
Helix 17
AB8
A
320 324Right-handed alpha
Helix 18
AB9
A
357 375Right-handed alpha
Helix 19
AC1
B
6 10Right-handed 310
Helix 20
AC2
B
11 30Right-handed alpha
Helix 21
AC3
B
45 55Right-handed alpha
Helix 22
AC4
B
68 72Right-handed 310
Helix 23
AC5
B
88 101Right-handed alpha
Helix 24
AC6
B
102 108Right-handed alpha
Helix 25
AC7
B
109 129Right-handed alpha
Helix 26
AC8
B
136 140Right-handed alpha
Helix 27
AC9
B
140 154Right-handed alpha
Helix 28
AD1
B
156 158Right-handed 310
Helix 29
AD2
B
159 171Right-handed alpha
Helix 30
AD3
B
187 211Right-handed alpha
Helix 31
AD4
B
215 223Right-handed alpha
Helix 32
AD5
B
231 263Right-handed alpha
Helix 33
AD6
B
264 274Right-handed alpha
Helix 34
AD7
B
277 289Right-handed alpha
Helix 35
AD8
B
320 324Right-handed alpha
Helix 36
AD9
B
357 375Right-handed alpha
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There are 8 sheets in PDB entry 7AYX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 34first strand
Strand 2
A
40 43anti-parallel
Strand 3
A
315 319parallel
Strand 4
A
294 299anti-parallel
Strand 5
A
59 60anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 135first strand
Strand 2
A
402 407anti-parallel
Strand 3
A
376 380anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 305first strand
Strand 2
A
308 310anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 389first strand
Strand 2
A
398 400anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 34first strand
Strand 2
B
40 43anti-parallel
Strand 3
B
315 319parallel
Strand 4
B
294 299anti-parallel
Strand 5
B
59 60anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 135first strand
Strand 2
B
402 407anti-parallel
Strand 3
B
376 380anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
303 305first strand
Strand 2
B
308 310anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
388 389first strand
Strand 2
B
398 400anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il