Analysis of interatomic Contacts of Structural Units in PDB entry:
7B01


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7B01 entry

There is 1 chain in PDB entry 7B01 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 820SER 1410
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7B01. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
835 851Right-handed alpha
Helix 2
AA2
A
861 872Right-handed alpha
Helix 3
AA3
A
883 892Right-handed alpha
Helix 4
AA4
A
901 906Right-handed alpha
Helix 5
AA5
A
909 914Right-handed alpha
Helix 6
AA6
A
950 960Right-handed alpha
Helix 7
AA7
A
972 983Right-handed alpha
Helix 8
AA8
A
1004 1020Right-handed alpha
Helix 9
AA9
A
1028 1038Right-handed alpha
Helix 10
AB1
A
1047 1049Right-handed 310
Helix 11
AB2
A
1050 1056Right-handed alpha
Helix 12
AB3
A
1091 1102Right-handed alpha
Helix 13
AB4
A
1105 1116Right-handed alpha
Helix 14
AB5
A
1123 1131Right-handed alpha
Helix 15
AB6
A
1133 1146Right-handed alpha
Helix 16
AB7
A
1154 1171Right-handed alpha
Helix 17
AB8
A
1175 1187Right-handed alpha
Helix 18
AB9
A
1391 1397Right-handed alpha
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There are 9 sheets in PDB entry 7B01. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
853 857first strand
Strand 2
A
825 829parallel
Strand 3
A
878 882parallel
Strand 4
A
1078 1085anti-parallel
Strand 5
A
924 931anti-parallel
Strand 6
A
1120 1121anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
917 918first strand
Strand 2
A
921 922anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
964 966first strand
Strand 2
A
1041 1046parallel
Strand 3
A
933 937anti-parallel
Strand 4
A
1061 1064anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
989 990first strand
Strand 2
A
995 996anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1068 1069first strand
Strand 2
A
1072 1073anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1201 1204first strand
Strand 2
A
1282 1290anti-parallel
Strand 3
A
1223 1232anti-parallel
Strand 4
A
1261 1263anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1216 1218first strand
Strand 2
A
1268 1274anti-parallel
Strand 3
A
1241 1245anti-parallel
Strand 4
A
1252 1253anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1301 1302first strand
Strand 2
A
1326 1328parallel
Strand 3
A
1387 1390anti-parallel
Strand 4
A
1357 1361anti-parallel
Strand 5
A
1369 1372anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1308 1311first strand
Strand 2
A
1400 1409anti-parallel
Strand 3
A
1336 1344anti-parallel
Strand 4
A
1376 1380anti-parallel
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